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Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database

MATERIALS AND METHODS: Patients with a primary diagnosis of AR (ICD-9-CM code: 477.9) in 2010 were included, and the National Health Insurance Research Database in Taiwan was used as the data source. Association rule mining and social network analysis were used to establish and explore the CHM netwo...

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Autores principales: Lu, Yen-Chu, Yang, Ching-Wei, Lin, Yi-Hsuan, Hsueh, Ju-Yu, Chen, Jiun-Liang, Yang, Sien-Hung, Chen, Yu-Chun, Chen, Hsing-Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7665915/
https://www.ncbi.nlm.nih.gov/pubmed/33204289
http://dx.doi.org/10.1155/2020/5979708
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author Lu, Yen-Chu
Yang, Ching-Wei
Lin, Yi-Hsuan
Hsueh, Ju-Yu
Chen, Jiun-Liang
Yang, Sien-Hung
Chen, Yu-Chun
Chen, Hsing-Yu
author_facet Lu, Yen-Chu
Yang, Ching-Wei
Lin, Yi-Hsuan
Hsueh, Ju-Yu
Chen, Jiun-Liang
Yang, Sien-Hung
Chen, Yu-Chun
Chen, Hsing-Yu
author_sort Lu, Yen-Chu
collection PubMed
description MATERIALS AND METHODS: Patients with a primary diagnosis of AR (ICD-9-CM code: 477.9) in 2010 were included, and the National Health Insurance Research Database in Taiwan was used as the data source. Association rule mining and social network analysis were used to establish and explore the CHM network. Possible molecular pathways of the CHM network were summarized and compared with commonly used western medicine (WM) by conducting overrepresentation analysis in the Reactome pathway database. The potential proteins acted by CHMs were obtained from the CHM ingredient-protein databases, including STITCH, TCMSP, TCMID, and TCM@Taiwan. RESULTS: There were 89,148 AR subjects found in 2010, and a total of 33,507 patients ever used CHM. On an average, 5.6 types of CHMs were utilized per prescription. Xin-Yi-Qing-Fei-Tang was used most frequently (25.5% of 222,279 prescriptions), while Xiao-Qing-Long-Tang with Xin-Yi-San was the most commonly prescribed CHM-CHM combination. Up to six distinctive clusters could be found among the CHM network, and core CHMs could be found for AR, such as Xiao-Qing-Long-Tang and Xin-Yi-Qing-Fei-Tang. A total of 140 molecular pathways were covered by the CHM network (2,432 ingredients from 31 kinds of CHMs), while 39 WMs covered 55 pathways. Among pathways responding to the immune system, WM mainly acted on cytokine signaling-related pathways, while CHM mostly acted on neutrophil/macrophage-related innate pathways and dendritic cell-related adaptive immunity pathways. CONCLUSION: Our study demonstrated and analyzed the CHM network for AR. Core CHM for AR and possible molecular pathways were presented as well, and this information is crucial for researchers to select candidates for CHM-related studies.
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spelling pubmed-76659152020-11-16 Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database Lu, Yen-Chu Yang, Ching-Wei Lin, Yi-Hsuan Hsueh, Ju-Yu Chen, Jiun-Liang Yang, Sien-Hung Chen, Yu-Chun Chen, Hsing-Yu Evid Based Complement Alternat Med Research Article MATERIALS AND METHODS: Patients with a primary diagnosis of AR (ICD-9-CM code: 477.9) in 2010 were included, and the National Health Insurance Research Database in Taiwan was used as the data source. Association rule mining and social network analysis were used to establish and explore the CHM network. Possible molecular pathways of the CHM network were summarized and compared with commonly used western medicine (WM) by conducting overrepresentation analysis in the Reactome pathway database. The potential proteins acted by CHMs were obtained from the CHM ingredient-protein databases, including STITCH, TCMSP, TCMID, and TCM@Taiwan. RESULTS: There were 89,148 AR subjects found in 2010, and a total of 33,507 patients ever used CHM. On an average, 5.6 types of CHMs were utilized per prescription. Xin-Yi-Qing-Fei-Tang was used most frequently (25.5% of 222,279 prescriptions), while Xiao-Qing-Long-Tang with Xin-Yi-San was the most commonly prescribed CHM-CHM combination. Up to six distinctive clusters could be found among the CHM network, and core CHMs could be found for AR, such as Xiao-Qing-Long-Tang and Xin-Yi-Qing-Fei-Tang. A total of 140 molecular pathways were covered by the CHM network (2,432 ingredients from 31 kinds of CHMs), while 39 WMs covered 55 pathways. Among pathways responding to the immune system, WM mainly acted on cytokine signaling-related pathways, while CHM mostly acted on neutrophil/macrophage-related innate pathways and dendritic cell-related adaptive immunity pathways. CONCLUSION: Our study demonstrated and analyzed the CHM network for AR. Core CHM for AR and possible molecular pathways were presented as well, and this information is crucial for researchers to select candidates for CHM-related studies. Hindawi 2020-11-05 /pmc/articles/PMC7665915/ /pubmed/33204289 http://dx.doi.org/10.1155/2020/5979708 Text en Copyright © 2020 Yen-Chu Lu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lu, Yen-Chu
Yang, Ching-Wei
Lin, Yi-Hsuan
Hsueh, Ju-Yu
Chen, Jiun-Liang
Yang, Sien-Hung
Chen, Yu-Chun
Chen, Hsing-Yu
Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database
title Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database
title_full Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database
title_fullStr Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database
title_full_unstemmed Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database
title_short Identifying the Chinese Herbal Medicine Network and Core Formula for Allergic Rhinitis on a Real-World Database
title_sort identifying the chinese herbal medicine network and core formula for allergic rhinitis on a real-world database
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7665915/
https://www.ncbi.nlm.nih.gov/pubmed/33204289
http://dx.doi.org/10.1155/2020/5979708
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