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C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis

Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for th...

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Autores principales: Alva-Diaz, Carlos, Alarcon-Ruiz, Christoper A., Pacheco-Barrios, Kevin, Mori, Nicanor, Pacheco-Mendoza, Josmel, Traynor, Bryan J., Rivera-Valdivia, Andrea, Lertwilaiwittaya, Pongtawat, Bird, Thomas D., Cornejo-Olivas, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667021/
https://www.ncbi.nlm.nih.gov/pubmed/33240313
http://dx.doi.org/10.3389/fgene.2020.551780
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author Alva-Diaz, Carlos
Alarcon-Ruiz, Christoper A.
Pacheco-Barrios, Kevin
Mori, Nicanor
Pacheco-Mendoza, Josmel
Traynor, Bryan J.
Rivera-Valdivia, Andrea
Lertwilaiwittaya, Pongtawat
Bird, Thomas D.
Cornejo-Olivas, Mario
author_facet Alva-Diaz, Carlos
Alarcon-Ruiz, Christoper A.
Pacheco-Barrios, Kevin
Mori, Nicanor
Pacheco-Mendoza, Josmel
Traynor, Bryan J.
Rivera-Valdivia, Andrea
Lertwilaiwittaya, Pongtawat
Bird, Thomas D.
Cornejo-Olivas, Mario
author_sort Alva-Diaz, Carlos
collection PubMed
description Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for the frequency of the hexanucleotide repeat expansion of the C9orf72 gene in HLD patients. Methods: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018, and updated in July 2020. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the C9orf72 gene were selected and reviewed; this process was duplicated. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal to or >30 G(4)C(2) repeats. Cases with intermediate alleles with 20–29 repeat are also analyzed. Pooled frequency and 95% CI were calculated using random-effects models. Results: Nine out of 219 studies were selected, reporting 1,123 affected individuals with HLD. Among them, 18 individuals carried C9orf72 expansion, representing 1% (95% CI: 0–2%, I(2) = 0%) of the pooled frequency. Seven selected studies came from European centers, one was reported at a US center, and one came from a South-African center. We identified five individuals carrying intermediate alleles representing 3% (95% CI: 0–14%, I(2) = 78.5%). Conclusions: The frequency of C9orf72 unstable hexanucleotide repeat expansion in HLD patients is very low. Further studies with more accurate clinical data and from different ethnic backgrounds are needed to confirm this observation.
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spelling pubmed-76670212020-11-24 C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis Alva-Diaz, Carlos Alarcon-Ruiz, Christoper A. Pacheco-Barrios, Kevin Mori, Nicanor Pacheco-Mendoza, Josmel Traynor, Bryan J. Rivera-Valdivia, Andrea Lertwilaiwittaya, Pongtawat Bird, Thomas D. Cornejo-Olivas, Mario Front Genet Genetics Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for the frequency of the hexanucleotide repeat expansion of the C9orf72 gene in HLD patients. Methods: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018, and updated in July 2020. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the C9orf72 gene were selected and reviewed; this process was duplicated. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal to or >30 G(4)C(2) repeats. Cases with intermediate alleles with 20–29 repeat are also analyzed. Pooled frequency and 95% CI were calculated using random-effects models. Results: Nine out of 219 studies were selected, reporting 1,123 affected individuals with HLD. Among them, 18 individuals carried C9orf72 expansion, representing 1% (95% CI: 0–2%, I(2) = 0%) of the pooled frequency. Seven selected studies came from European centers, one was reported at a US center, and one came from a South-African center. We identified five individuals carrying intermediate alleles representing 3% (95% CI: 0–14%, I(2) = 78.5%). Conclusions: The frequency of C9orf72 unstable hexanucleotide repeat expansion in HLD patients is very low. Further studies with more accurate clinical data and from different ethnic backgrounds are needed to confirm this observation. Frontiers Media S.A. 2020-11-02 /pmc/articles/PMC7667021/ /pubmed/33240313 http://dx.doi.org/10.3389/fgene.2020.551780 Text en Copyright © 2020 Alva-Diaz, Alarcon-Ruiz, Pacheco-Barrios, Mori, Pacheco-Mendoza, Traynor, Rivera-Valdivia, Lertwilaiwittaya, Bird and Cornejo-Olivas. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Alva-Diaz, Carlos
Alarcon-Ruiz, Christoper A.
Pacheco-Barrios, Kevin
Mori, Nicanor
Pacheco-Mendoza, Josmel
Traynor, Bryan J.
Rivera-Valdivia, Andrea
Lertwilaiwittaya, Pongtawat
Bird, Thomas D.
Cornejo-Olivas, Mario
C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
title C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
title_full C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
title_fullStr C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
title_full_unstemmed C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
title_short C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
title_sort c9orf72 hexanucleotide repeat in huntington-like patients: systematic review and meta-analysis
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667021/
https://www.ncbi.nlm.nih.gov/pubmed/33240313
http://dx.doi.org/10.3389/fgene.2020.551780
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