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C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for th...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667021/ https://www.ncbi.nlm.nih.gov/pubmed/33240313 http://dx.doi.org/10.3389/fgene.2020.551780 |
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author | Alva-Diaz, Carlos Alarcon-Ruiz, Christoper A. Pacheco-Barrios, Kevin Mori, Nicanor Pacheco-Mendoza, Josmel Traynor, Bryan J. Rivera-Valdivia, Andrea Lertwilaiwittaya, Pongtawat Bird, Thomas D. Cornejo-Olivas, Mario |
author_facet | Alva-Diaz, Carlos Alarcon-Ruiz, Christoper A. Pacheco-Barrios, Kevin Mori, Nicanor Pacheco-Mendoza, Josmel Traynor, Bryan J. Rivera-Valdivia, Andrea Lertwilaiwittaya, Pongtawat Bird, Thomas D. Cornejo-Olivas, Mario |
author_sort | Alva-Diaz, Carlos |
collection | PubMed |
description | Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for the frequency of the hexanucleotide repeat expansion of the C9orf72 gene in HLD patients. Methods: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018, and updated in July 2020. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the C9orf72 gene were selected and reviewed; this process was duplicated. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal to or >30 G(4)C(2) repeats. Cases with intermediate alleles with 20–29 repeat are also analyzed. Pooled frequency and 95% CI were calculated using random-effects models. Results: Nine out of 219 studies were selected, reporting 1,123 affected individuals with HLD. Among them, 18 individuals carried C9orf72 expansion, representing 1% (95% CI: 0–2%, I(2) = 0%) of the pooled frequency. Seven selected studies came from European centers, one was reported at a US center, and one came from a South-African center. We identified five individuals carrying intermediate alleles representing 3% (95% CI: 0–14%, I(2) = 78.5%). Conclusions: The frequency of C9orf72 unstable hexanucleotide repeat expansion in HLD patients is very low. Further studies with more accurate clinical data and from different ethnic backgrounds are needed to confirm this observation. |
format | Online Article Text |
id | pubmed-7667021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76670212020-11-24 C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis Alva-Diaz, Carlos Alarcon-Ruiz, Christoper A. Pacheco-Barrios, Kevin Mori, Nicanor Pacheco-Mendoza, Josmel Traynor, Bryan J. Rivera-Valdivia, Andrea Lertwilaiwittaya, Pongtawat Bird, Thomas D. Cornejo-Olivas, Mario Front Genet Genetics Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for the frequency of the hexanucleotide repeat expansion of the C9orf72 gene in HLD patients. Methods: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018, and updated in July 2020. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the C9orf72 gene were selected and reviewed; this process was duplicated. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal to or >30 G(4)C(2) repeats. Cases with intermediate alleles with 20–29 repeat are also analyzed. Pooled frequency and 95% CI were calculated using random-effects models. Results: Nine out of 219 studies were selected, reporting 1,123 affected individuals with HLD. Among them, 18 individuals carried C9orf72 expansion, representing 1% (95% CI: 0–2%, I(2) = 0%) of the pooled frequency. Seven selected studies came from European centers, one was reported at a US center, and one came from a South-African center. We identified five individuals carrying intermediate alleles representing 3% (95% CI: 0–14%, I(2) = 78.5%). Conclusions: The frequency of C9orf72 unstable hexanucleotide repeat expansion in HLD patients is very low. Further studies with more accurate clinical data and from different ethnic backgrounds are needed to confirm this observation. Frontiers Media S.A. 2020-11-02 /pmc/articles/PMC7667021/ /pubmed/33240313 http://dx.doi.org/10.3389/fgene.2020.551780 Text en Copyright © 2020 Alva-Diaz, Alarcon-Ruiz, Pacheco-Barrios, Mori, Pacheco-Mendoza, Traynor, Rivera-Valdivia, Lertwilaiwittaya, Bird and Cornejo-Olivas. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Alva-Diaz, Carlos Alarcon-Ruiz, Christoper A. Pacheco-Barrios, Kevin Mori, Nicanor Pacheco-Mendoza, Josmel Traynor, Bryan J. Rivera-Valdivia, Andrea Lertwilaiwittaya, Pongtawat Bird, Thomas D. Cornejo-Olivas, Mario C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis |
title | C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis |
title_full | C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis |
title_fullStr | C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis |
title_full_unstemmed | C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis |
title_short | C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis |
title_sort | c9orf72 hexanucleotide repeat in huntington-like patients: systematic review and meta-analysis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667021/ https://www.ncbi.nlm.nih.gov/pubmed/33240313 http://dx.doi.org/10.3389/fgene.2020.551780 |
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