Cargando…
Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum
BACKGROUND: Colorectal cancer (CRC) is an important disease worldwide, accounting for the second highest number of cancer-related deaths and the third highest number of new cancer cases. The blood test is a simple and minimally invasive diagnostic test. However, there is currently no blood test that...
Autores principales: | , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Baishideng Publishing Group Inc
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667458/ https://www.ncbi.nlm.nih.gov/pubmed/33250963 http://dx.doi.org/10.4251/wjgo.v12.i11.1311 |
_version_ | 1783610319056142336 |
---|---|
author | Ito, Hiroaki Uragami, Naoyuki Miyazaki, Tomokazu Yang, William Issha, Kenji Matsuo, Kai Kimura, Satoshi Arai, Yuji Tokunaga, Hiromasa Okada, Saiko Kawamura, Machiko Yokoyama, Noboru Kushima, Miki Inoue, Haruhiro Fukagai, Takashi Kamijo, Yumi |
author_facet | Ito, Hiroaki Uragami, Naoyuki Miyazaki, Tomokazu Yang, William Issha, Kenji Matsuo, Kai Kimura, Satoshi Arai, Yuji Tokunaga, Hiromasa Okada, Saiko Kawamura, Machiko Yokoyama, Noboru Kushima, Miki Inoue, Haruhiro Fukagai, Takashi Kamijo, Yumi |
author_sort | Ito, Hiroaki |
collection | PubMed |
description | BACKGROUND: Colorectal cancer (CRC) is an important disease worldwide, accounting for the second highest number of cancer-related deaths and the third highest number of new cancer cases. The blood test is a simple and minimally invasive diagnostic test. However, there is currently no blood test that can accurately diagnose CRC. AIM: To develop a comprehensive, spontaneous, minimally invasive, label-free, blood-based CRC screening technique based on Raman spectroscopy. METHODS: We used Raman spectra recorded using 184 serum samples obtained from patients undergoing colonoscopies. Patients with malignant tumor histories as well as those with cancers in organs other than the large intestine were excluded. Consequently, the specific diseases of 184 patients were CRC (12), rectal neuroendocrine tumor (2), colorectal adenoma (68), colorectal hyperplastic polyp (18), and others (84). We used the 1064-nm wavelength laser for excitation. The power of the laser was set to 200 mW. RESULTS: Use of the recorded Raman spectra as training data allowed the construction of a boosted tree CRC prediction model based on machine learning. Therefore, the generalized R(2) values for CRC, adenomas, hyperplastic polyps, and neuroendocrine tumors were 0.9982, 0.9630, 0.9962, and 0.9986, respectively. CONCLUSION: For machine learning using Raman spectral data, a highly accurate CRC prediction model with a high R(2) value was constructed. We are currently planning studies to demonstrate the accuracy of this model with a large amount of additional data. |
format | Online Article Text |
id | pubmed-7667458 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Baishideng Publishing Group Inc |
record_format | MEDLINE/PubMed |
spelling | pubmed-76674582020-11-27 Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum Ito, Hiroaki Uragami, Naoyuki Miyazaki, Tomokazu Yang, William Issha, Kenji Matsuo, Kai Kimura, Satoshi Arai, Yuji Tokunaga, Hiromasa Okada, Saiko Kawamura, Machiko Yokoyama, Noboru Kushima, Miki Inoue, Haruhiro Fukagai, Takashi Kamijo, Yumi World J Gastrointest Oncol Retrospective Study BACKGROUND: Colorectal cancer (CRC) is an important disease worldwide, accounting for the second highest number of cancer-related deaths and the third highest number of new cancer cases. The blood test is a simple and minimally invasive diagnostic test. However, there is currently no blood test that can accurately diagnose CRC. AIM: To develop a comprehensive, spontaneous, minimally invasive, label-free, blood-based CRC screening technique based on Raman spectroscopy. METHODS: We used Raman spectra recorded using 184 serum samples obtained from patients undergoing colonoscopies. Patients with malignant tumor histories as well as those with cancers in organs other than the large intestine were excluded. Consequently, the specific diseases of 184 patients were CRC (12), rectal neuroendocrine tumor (2), colorectal adenoma (68), colorectal hyperplastic polyp (18), and others (84). We used the 1064-nm wavelength laser for excitation. The power of the laser was set to 200 mW. RESULTS: Use of the recorded Raman spectra as training data allowed the construction of a boosted tree CRC prediction model based on machine learning. Therefore, the generalized R(2) values for CRC, adenomas, hyperplastic polyps, and neuroendocrine tumors were 0.9982, 0.9630, 0.9962, and 0.9986, respectively. CONCLUSION: For machine learning using Raman spectral data, a highly accurate CRC prediction model with a high R(2) value was constructed. We are currently planning studies to demonstrate the accuracy of this model with a large amount of additional data. Baishideng Publishing Group Inc 2020-11-15 2020-11-15 /pmc/articles/PMC7667458/ /pubmed/33250963 http://dx.doi.org/10.4251/wjgo.v12.i11.1311 Text en ©The Author(s) 2020. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/Licenses/by-nc/4.0/ |
spellingShingle | Retrospective Study Ito, Hiroaki Uragami, Naoyuki Miyazaki, Tomokazu Yang, William Issha, Kenji Matsuo, Kai Kimura, Satoshi Arai, Yuji Tokunaga, Hiromasa Okada, Saiko Kawamura, Machiko Yokoyama, Noboru Kushima, Miki Inoue, Haruhiro Fukagai, Takashi Kamijo, Yumi Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum |
title | Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum |
title_full | Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum |
title_fullStr | Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum |
title_full_unstemmed | Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum |
title_short | Highly accurate colorectal cancer prediction model based on Raman spectroscopy using patient serum |
title_sort | highly accurate colorectal cancer prediction model based on raman spectroscopy using patient serum |
topic | Retrospective Study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7667458/ https://www.ncbi.nlm.nih.gov/pubmed/33250963 http://dx.doi.org/10.4251/wjgo.v12.i11.1311 |
work_keys_str_mv | AT itohiroaki highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT uragaminaoyuki highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT miyazakitomokazu highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT yangwilliam highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT isshakenji highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT matsuokai highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT kimurasatoshi highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT araiyuji highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT tokunagahiromasa highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT okadasaiko highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT kawamuramachiko highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT yokoyamanoboru highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT kushimamiki highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT inoueharuhiro highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT fukagaitakashi highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum AT kamijoyumi highlyaccuratecolorectalcancerpredictionmodelbasedonramanspectroscopyusingpatientserum |