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PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms

Photoplethysmography (PPG) is increasingly used in digital health, exceptionally in smartwatches. The PPG signal contains valuable information about heart activity, and there is lots of research interest in its means and analysis for cardiovascular diseases. Unfortunately, to our knowledge, there is...

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Autores principales: Tang, Qunfeng, Chen, Zhencheng, Allen, John, Alian, Aymen, Menon, Carlo, Ward, Rabab, Elgendi, Mohamed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7668389/
https://www.ncbi.nlm.nih.gov/pubmed/33224967
http://dx.doi.org/10.3389/fmed.2020.597774
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author Tang, Qunfeng
Chen, Zhencheng
Allen, John
Alian, Aymen
Menon, Carlo
Ward, Rabab
Elgendi, Mohamed
author_facet Tang, Qunfeng
Chen, Zhencheng
Allen, John
Alian, Aymen
Menon, Carlo
Ward, Rabab
Elgendi, Mohamed
author_sort Tang, Qunfeng
collection PubMed
description Photoplethysmography (PPG) is increasingly used in digital health, exceptionally in smartwatches. The PPG signal contains valuable information about heart activity, and there is lots of research interest in its means and analysis for cardiovascular diseases. Unfortunately, to our knowledge, there is no arrhythmic PPG dataset publicly available—this paper attempt to provide a toolbox that can generate synthesized arrhythmic PPG signals. The model of a single PPG pulse in this toolbox utilizes two combined Gaussian functions. This toolbox supports synthesizing PPG waveform with regular heartbeats and three irregular heartbeats: compensation, interpolation, and reset. The user can generate a large amount of PPG data with a certain irregularity, with different sampling frequency, time length, and a range of noise types (Gaussian noise and multi-frequency noise) can be added to the synthesized PPG which can all be modified from the interface, and different types of arrhythmic PPGs (as calculated by the model) generated. The generation for large PPG datasets that simulate PPG collected from real humans could be used for testing the robustness of developed algorithms that are targeting arrhythmic PPG signals. Our PPG synthesis tool is publicly available.
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spelling pubmed-76683892020-11-20 PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms Tang, Qunfeng Chen, Zhencheng Allen, John Alian, Aymen Menon, Carlo Ward, Rabab Elgendi, Mohamed Front Med (Lausanne) Medicine Photoplethysmography (PPG) is increasingly used in digital health, exceptionally in smartwatches. The PPG signal contains valuable information about heart activity, and there is lots of research interest in its means and analysis for cardiovascular diseases. Unfortunately, to our knowledge, there is no arrhythmic PPG dataset publicly available—this paper attempt to provide a toolbox that can generate synthesized arrhythmic PPG signals. The model of a single PPG pulse in this toolbox utilizes two combined Gaussian functions. This toolbox supports synthesizing PPG waveform with regular heartbeats and three irregular heartbeats: compensation, interpolation, and reset. The user can generate a large amount of PPG data with a certain irregularity, with different sampling frequency, time length, and a range of noise types (Gaussian noise and multi-frequency noise) can be added to the synthesized PPG which can all be modified from the interface, and different types of arrhythmic PPGs (as calculated by the model) generated. The generation for large PPG datasets that simulate PPG collected from real humans could be used for testing the robustness of developed algorithms that are targeting arrhythmic PPG signals. Our PPG synthesis tool is publicly available. Frontiers Media S.A. 2020-11-02 /pmc/articles/PMC7668389/ /pubmed/33224967 http://dx.doi.org/10.3389/fmed.2020.597774 Text en Copyright © 2020 Tang, Chen, Allen, Alian, Menon, Ward and Elgendi. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Tang, Qunfeng
Chen, Zhencheng
Allen, John
Alian, Aymen
Menon, Carlo
Ward, Rabab
Elgendi, Mohamed
PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms
title PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms
title_full PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms
title_fullStr PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms
title_full_unstemmed PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms
title_short PPGSynth: An Innovative Toolbox for Synthesizing Regular and Irregular Photoplethysmography Waveforms
title_sort ppgsynth: an innovative toolbox for synthesizing regular and irregular photoplethysmography waveforms
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7668389/
https://www.ncbi.nlm.nih.gov/pubmed/33224967
http://dx.doi.org/10.3389/fmed.2020.597774
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