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Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients

Circular RNA (circRNA) is a novel member of endogenous noncoding RNAs with widespread distribution and diverse cellular functions. Recently, circRNAs have been identified for their enrichment and stability in exosomes. However, the roles of circRNAs from umbilical cord blood exosomes in gestational...

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Autores principales: Cao, Minkai, Zhang, Le, Lin, Yu, Li, Zhengying, Xu, Jianjuan, Shi, Zhonghua, Chen, Zhong, Ma, Jinqi, Wen, Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7670577/
https://www.ncbi.nlm.nih.gov/pubmed/33146699
http://dx.doi.org/10.1042/BSR20201946
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author Cao, Minkai
Zhang, Le
Lin, Yu
Li, Zhengying
Xu, Jianjuan
Shi, Zhonghua
Chen, Zhong
Ma, Jinqi
Wen, Juan
author_facet Cao, Minkai
Zhang, Le
Lin, Yu
Li, Zhengying
Xu, Jianjuan
Shi, Zhonghua
Chen, Zhong
Ma, Jinqi
Wen, Juan
author_sort Cao, Minkai
collection PubMed
description Circular RNA (circRNA) is a novel member of endogenous noncoding RNAs with widespread distribution and diverse cellular functions. Recently, circRNAs have been identified for their enrichment and stability in exosomes. However, the roles of circRNAs from umbilical cord blood exosomes in gestational diabetes mellitus (GDM) occurrence and fetus growth remains poorly understood. In the present study, we used microarray technology to construct a comparative circRNA profiling of umbilical cord blood exosomes between GDM patients and controls. We found the exosome particle size was larger, and the exosome concentration was higher in the GDM patients. A total of 88,371 circRNAs in umbilical cord blood exosomes from two groups were evaluated. Of these, 229 circRNAs were significantly up-regulated and 278 circRNAs were significantly down-regulated in the GDM patients. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses demonstrated that circRNA parental genes involved in the regulation of metabolic process, growth and development were significantly enriched, which are important in GDM development and fetus growth. Further circRNA/miRNA interactions analysis showed that most of the exosomal circRNAs harbored miRNA binding sites, and some miRNAs were associated with GDM. Collectively, these results lay a foundation for extensive studies on the role of exosomal circRNAs in GDM development and fetus growth.
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spelling pubmed-76705772020-11-19 Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients Cao, Minkai Zhang, Le Lin, Yu Li, Zhengying Xu, Jianjuan Shi, Zhonghua Chen, Zhong Ma, Jinqi Wen, Juan Biosci Rep Bioinformatics Circular RNA (circRNA) is a novel member of endogenous noncoding RNAs with widespread distribution and diverse cellular functions. Recently, circRNAs have been identified for their enrichment and stability in exosomes. However, the roles of circRNAs from umbilical cord blood exosomes in gestational diabetes mellitus (GDM) occurrence and fetus growth remains poorly understood. In the present study, we used microarray technology to construct a comparative circRNA profiling of umbilical cord blood exosomes between GDM patients and controls. We found the exosome particle size was larger, and the exosome concentration was higher in the GDM patients. A total of 88,371 circRNAs in umbilical cord blood exosomes from two groups were evaluated. Of these, 229 circRNAs were significantly up-regulated and 278 circRNAs were significantly down-regulated in the GDM patients. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses demonstrated that circRNA parental genes involved in the regulation of metabolic process, growth and development were significantly enriched, which are important in GDM development and fetus growth. Further circRNA/miRNA interactions analysis showed that most of the exosomal circRNAs harbored miRNA binding sites, and some miRNAs were associated with GDM. Collectively, these results lay a foundation for extensive studies on the role of exosomal circRNAs in GDM development and fetus growth. Portland Press Ltd. 2020-11-17 /pmc/articles/PMC7670577/ /pubmed/33146699 http://dx.doi.org/10.1042/BSR20201946 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY).
spellingShingle Bioinformatics
Cao, Minkai
Zhang, Le
Lin, Yu
Li, Zhengying
Xu, Jianjuan
Shi, Zhonghua
Chen, Zhong
Ma, Jinqi
Wen, Juan
Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
title Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
title_full Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
title_fullStr Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
title_full_unstemmed Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
title_short Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
title_sort circular rna expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7670577/
https://www.ncbi.nlm.nih.gov/pubmed/33146699
http://dx.doi.org/10.1042/BSR20201946
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