Cargando…
Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients
Circular RNA (circRNA) is a novel member of endogenous noncoding RNAs with widespread distribution and diverse cellular functions. Recently, circRNAs have been identified for their enrichment and stability in exosomes. However, the roles of circRNAs from umbilical cord blood exosomes in gestational...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7670577/ https://www.ncbi.nlm.nih.gov/pubmed/33146699 http://dx.doi.org/10.1042/BSR20201946 |
_version_ | 1783610766226620416 |
---|---|
author | Cao, Minkai Zhang, Le Lin, Yu Li, Zhengying Xu, Jianjuan Shi, Zhonghua Chen, Zhong Ma, Jinqi Wen, Juan |
author_facet | Cao, Minkai Zhang, Le Lin, Yu Li, Zhengying Xu, Jianjuan Shi, Zhonghua Chen, Zhong Ma, Jinqi Wen, Juan |
author_sort | Cao, Minkai |
collection | PubMed |
description | Circular RNA (circRNA) is a novel member of endogenous noncoding RNAs with widespread distribution and diverse cellular functions. Recently, circRNAs have been identified for their enrichment and stability in exosomes. However, the roles of circRNAs from umbilical cord blood exosomes in gestational diabetes mellitus (GDM) occurrence and fetus growth remains poorly understood. In the present study, we used microarray technology to construct a comparative circRNA profiling of umbilical cord blood exosomes between GDM patients and controls. We found the exosome particle size was larger, and the exosome concentration was higher in the GDM patients. A total of 88,371 circRNAs in umbilical cord blood exosomes from two groups were evaluated. Of these, 229 circRNAs were significantly up-regulated and 278 circRNAs were significantly down-regulated in the GDM patients. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses demonstrated that circRNA parental genes involved in the regulation of metabolic process, growth and development were significantly enriched, which are important in GDM development and fetus growth. Further circRNA/miRNA interactions analysis showed that most of the exosomal circRNAs harbored miRNA binding sites, and some miRNAs were associated with GDM. Collectively, these results lay a foundation for extensive studies on the role of exosomal circRNAs in GDM development and fetus growth. |
format | Online Article Text |
id | pubmed-7670577 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76705772020-11-19 Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients Cao, Minkai Zhang, Le Lin, Yu Li, Zhengying Xu, Jianjuan Shi, Zhonghua Chen, Zhong Ma, Jinqi Wen, Juan Biosci Rep Bioinformatics Circular RNA (circRNA) is a novel member of endogenous noncoding RNAs with widespread distribution and diverse cellular functions. Recently, circRNAs have been identified for their enrichment and stability in exosomes. However, the roles of circRNAs from umbilical cord blood exosomes in gestational diabetes mellitus (GDM) occurrence and fetus growth remains poorly understood. In the present study, we used microarray technology to construct a comparative circRNA profiling of umbilical cord blood exosomes between GDM patients and controls. We found the exosome particle size was larger, and the exosome concentration was higher in the GDM patients. A total of 88,371 circRNAs in umbilical cord blood exosomes from two groups were evaluated. Of these, 229 circRNAs were significantly up-regulated and 278 circRNAs were significantly down-regulated in the GDM patients. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses demonstrated that circRNA parental genes involved in the regulation of metabolic process, growth and development were significantly enriched, which are important in GDM development and fetus growth. Further circRNA/miRNA interactions analysis showed that most of the exosomal circRNAs harbored miRNA binding sites, and some miRNAs were associated with GDM. Collectively, these results lay a foundation for extensive studies on the role of exosomal circRNAs in GDM development and fetus growth. Portland Press Ltd. 2020-11-17 /pmc/articles/PMC7670577/ /pubmed/33146699 http://dx.doi.org/10.1042/BSR20201946 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY). |
spellingShingle | Bioinformatics Cao, Minkai Zhang, Le Lin, Yu Li, Zhengying Xu, Jianjuan Shi, Zhonghua Chen, Zhong Ma, Jinqi Wen, Juan Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
title | Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
title_full | Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
title_fullStr | Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
title_full_unstemmed | Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
title_short | Circular RNA expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
title_sort | circular rna expression profiles in umbilical cord blood exosomes from normal and gestational diabetes mellitus patients |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7670577/ https://www.ncbi.nlm.nih.gov/pubmed/33146699 http://dx.doi.org/10.1042/BSR20201946 |
work_keys_str_mv | AT caominkai circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT zhangle circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT linyu circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT lizhengying circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT xujianjuan circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT shizhonghua circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT chenzhong circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT majinqi circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients AT wenjuan circularrnaexpressionprofilesinumbilicalcordbloodexosomesfromnormalandgestationaldiabetesmellituspatients |