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Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines

Functional connectivity analysis of resting‐state fMRI data has recently become one of the most common approaches to characterizing individual brain function. It has been widely suggested that the functional connectivity matrix is a useful approximate representation of the brain's connectivity,...

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Autores principales: Kopal, Jakub, Pidnebesna, Anna, Tomeček, David, Tintěra, Jaroslav, Hlinka, Jaroslav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7670643/
https://www.ncbi.nlm.nih.gov/pubmed/32881215
http://dx.doi.org/10.1002/hbm.25195
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author Kopal, Jakub
Pidnebesna, Anna
Tomeček, David
Tintěra, Jaroslav
Hlinka, Jaroslav
author_facet Kopal, Jakub
Pidnebesna, Anna
Tomeček, David
Tintěra, Jaroslav
Hlinka, Jaroslav
author_sort Kopal, Jakub
collection PubMed
description Functional connectivity analysis of resting‐state fMRI data has recently become one of the most common approaches to characterizing individual brain function. It has been widely suggested that the functional connectivity matrix is a useful approximate representation of the brain's connectivity, potentially providing behaviorally or clinically relevant markers. However, functional connectivity estimates are known to be detrimentally affected by various artifacts, including those due to in‐scanner head motion. Moreover, as individual functional connections generally covary only very weakly with head motion estimates, motion influence is difficult to quantify robustly, and prone to be neglected in practice. Although the use of individual estimates of head motion, or group‐level correlation of motion and functional connectivity has been suggested, a sufficiently sensitive measure of individual functional connectivity quality has not yet been established. We propose a new intuitive summary index, Typicality of Functional Connectivity, to capture deviations from standard brain functional connectivity patterns. In a resting‐state fMRI dataset of 245 healthy subjects, this measure was significantly correlated with individual head motion metrics. The results were further robustly reproduced across atlas granularity, preprocessing options, and other datasets, including 1,081 subjects from the Human Connectome Project. In principle, Typicality of Functional Connectivity should be sensitive also to other types of artifacts, processing errors, and possibly also brain pathology, allowing extensive use in data quality screening and quantification in functional connectivity studies as well as methodological investigations.
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spelling pubmed-76706432020-11-23 Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines Kopal, Jakub Pidnebesna, Anna Tomeček, David Tintěra, Jaroslav Hlinka, Jaroslav Hum Brain Mapp Research Articles Functional connectivity analysis of resting‐state fMRI data has recently become one of the most common approaches to characterizing individual brain function. It has been widely suggested that the functional connectivity matrix is a useful approximate representation of the brain's connectivity, potentially providing behaviorally or clinically relevant markers. However, functional connectivity estimates are known to be detrimentally affected by various artifacts, including those due to in‐scanner head motion. Moreover, as individual functional connections generally covary only very weakly with head motion estimates, motion influence is difficult to quantify robustly, and prone to be neglected in practice. Although the use of individual estimates of head motion, or group‐level correlation of motion and functional connectivity has been suggested, a sufficiently sensitive measure of individual functional connectivity quality has not yet been established. We propose a new intuitive summary index, Typicality of Functional Connectivity, to capture deviations from standard brain functional connectivity patterns. In a resting‐state fMRI dataset of 245 healthy subjects, this measure was significantly correlated with individual head motion metrics. The results were further robustly reproduced across atlas granularity, preprocessing options, and other datasets, including 1,081 subjects from the Human Connectome Project. In principle, Typicality of Functional Connectivity should be sensitive also to other types of artifacts, processing errors, and possibly also brain pathology, allowing extensive use in data quality screening and quantification in functional connectivity studies as well as methodological investigations. John Wiley & Sons, Inc. 2020-09-02 /pmc/articles/PMC7670643/ /pubmed/32881215 http://dx.doi.org/10.1002/hbm.25195 Text en © 2020 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Kopal, Jakub
Pidnebesna, Anna
Tomeček, David
Tintěra, Jaroslav
Hlinka, Jaroslav
Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines
title Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines
title_full Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines
title_fullStr Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines
title_full_unstemmed Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines
title_short Typicality of functional connectivity robustly captures motion artifacts in rs‐fMRI across datasets, atlases, and preprocessing pipelines
title_sort typicality of functional connectivity robustly captures motion artifacts in rs‐fmri across datasets, atlases, and preprocessing pipelines
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7670643/
https://www.ncbi.nlm.nih.gov/pubmed/32881215
http://dx.doi.org/10.1002/hbm.25195
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