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Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data

As the cost of sequencing drops rapidly, the amount of ‘omics data increases exponentially, making data visualization and interpretation—‘tertiary‘ analysis a bottleneck. Specialized analytical tools requiring technical expertise are available. However, consolidated and multi-faceted tools that are...

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Detalles Bibliográficos
Autores principales: Akhmedov, Murodzhon, Martinelli, Axel, Geiger, Roger, Kwee, Ivo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671354/
https://www.ncbi.nlm.nih.gov/pubmed/33575569
http://dx.doi.org/10.1093/nargab/lqz019
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author Akhmedov, Murodzhon
Martinelli, Axel
Geiger, Roger
Kwee, Ivo
author_facet Akhmedov, Murodzhon
Martinelli, Axel
Geiger, Roger
Kwee, Ivo
author_sort Akhmedov, Murodzhon
collection PubMed
description As the cost of sequencing drops rapidly, the amount of ‘omics data increases exponentially, making data visualization and interpretation—‘tertiary‘ analysis a bottleneck. Specialized analytical tools requiring technical expertise are available. However, consolidated and multi-faceted tools that are easy to use for life scientists is highly needed and currently lacking. Here we present Omics Playground, a user-friendly and interactive self-service bioinformatics platform for the in-depth analysis, visualization and interpretation of transcriptomics and proteomics data. It provides a large number of different tools in which special attention has been paid to single cell data. With Omics Playground, life scientists can easily perform complex data analysis and visualization without coding, and significantly reduce the time to discovery.
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spelling pubmed-76713542021-02-10 Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data Akhmedov, Murodzhon Martinelli, Axel Geiger, Roger Kwee, Ivo NAR Genom Bioinform Methods Article As the cost of sequencing drops rapidly, the amount of ‘omics data increases exponentially, making data visualization and interpretation—‘tertiary‘ analysis a bottleneck. Specialized analytical tools requiring technical expertise are available. However, consolidated and multi-faceted tools that are easy to use for life scientists is highly needed and currently lacking. Here we present Omics Playground, a user-friendly and interactive self-service bioinformatics platform for the in-depth analysis, visualization and interpretation of transcriptomics and proteomics data. It provides a large number of different tools in which special attention has been paid to single cell data. With Omics Playground, life scientists can easily perform complex data analysis and visualization without coding, and significantly reduce the time to discovery. Oxford University Press 2019-12-06 /pmc/articles/PMC7671354/ /pubmed/33575569 http://dx.doi.org/10.1093/nargab/lqz019 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Methods Article
Akhmedov, Murodzhon
Martinelli, Axel
Geiger, Roger
Kwee, Ivo
Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
title Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
title_full Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
title_fullStr Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
title_full_unstemmed Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
title_short Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
title_sort omics playground: a comprehensive self-service platform for visualization, analytics and exploration of big omics data
topic Methods Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671354/
https://www.ncbi.nlm.nih.gov/pubmed/33575569
http://dx.doi.org/10.1093/nargab/lqz019
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