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Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
As the cost of sequencing drops rapidly, the amount of ‘omics data increases exponentially, making data visualization and interpretation—‘tertiary‘ analysis a bottleneck. Specialized analytical tools requiring technical expertise are available. However, consolidated and multi-faceted tools that are...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671354/ https://www.ncbi.nlm.nih.gov/pubmed/33575569 http://dx.doi.org/10.1093/nargab/lqz019 |
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author | Akhmedov, Murodzhon Martinelli, Axel Geiger, Roger Kwee, Ivo |
author_facet | Akhmedov, Murodzhon Martinelli, Axel Geiger, Roger Kwee, Ivo |
author_sort | Akhmedov, Murodzhon |
collection | PubMed |
description | As the cost of sequencing drops rapidly, the amount of ‘omics data increases exponentially, making data visualization and interpretation—‘tertiary‘ analysis a bottleneck. Specialized analytical tools requiring technical expertise are available. However, consolidated and multi-faceted tools that are easy to use for life scientists is highly needed and currently lacking. Here we present Omics Playground, a user-friendly and interactive self-service bioinformatics platform for the in-depth analysis, visualization and interpretation of transcriptomics and proteomics data. It provides a large number of different tools in which special attention has been paid to single cell data. With Omics Playground, life scientists can easily perform complex data analysis and visualization without coding, and significantly reduce the time to discovery. |
format | Online Article Text |
id | pubmed-7671354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-76713542021-02-10 Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data Akhmedov, Murodzhon Martinelli, Axel Geiger, Roger Kwee, Ivo NAR Genom Bioinform Methods Article As the cost of sequencing drops rapidly, the amount of ‘omics data increases exponentially, making data visualization and interpretation—‘tertiary‘ analysis a bottleneck. Specialized analytical tools requiring technical expertise are available. However, consolidated and multi-faceted tools that are easy to use for life scientists is highly needed and currently lacking. Here we present Omics Playground, a user-friendly and interactive self-service bioinformatics platform for the in-depth analysis, visualization and interpretation of transcriptomics and proteomics data. It provides a large number of different tools in which special attention has been paid to single cell data. With Omics Playground, life scientists can easily perform complex data analysis and visualization without coding, and significantly reduce the time to discovery. Oxford University Press 2019-12-06 /pmc/articles/PMC7671354/ /pubmed/33575569 http://dx.doi.org/10.1093/nargab/lqz019 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Methods Article Akhmedov, Murodzhon Martinelli, Axel Geiger, Roger Kwee, Ivo Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data |
title | Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data |
title_full | Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data |
title_fullStr | Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data |
title_full_unstemmed | Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data |
title_short | Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data |
title_sort | omics playground: a comprehensive self-service platform for visualization, analytics and exploration of big omics data |
topic | Methods Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671354/ https://www.ncbi.nlm.nih.gov/pubmed/33575569 http://dx.doi.org/10.1093/nargab/lqz019 |
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