Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China

Taxus wallichiana is a member of the family Taxaceae, which is a unique and endangered species in China and is widely used for ornamental, material and medicinal purposes. The complete chloroplast genome of T. wallichiana was found to possess a total size of 128,168 bp. The GC content of T. wallichi...

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Autores principales: Ruan, Tian, Tan, Ruijing, Ma, WenJie, Li, Minghang, Zheng, Xuyi, He, Lifen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671594/
https://www.ncbi.nlm.nih.gov/pubmed/33367097
http://dx.doi.org/10.1080/23802359.2020.1799725
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author Ruan, Tian
Tan, Ruijing
Ma, WenJie
Li, Minghang
Zheng, Xuyi
He, Lifen
author_facet Ruan, Tian
Tan, Ruijing
Ma, WenJie
Li, Minghang
Zheng, Xuyi
He, Lifen
author_sort Ruan, Tian
collection PubMed
description Taxus wallichiana is a member of the family Taxaceae, which is a unique and endangered species in China and is widely used for ornamental, material and medicinal purposes. The complete chloroplast genome of T. wallichiana was found to possess a total size of 128,168 bp. The GC content of T. wallichiana chloroplast genome sequence is 37.3%, the overall nucleotide composition of chloroplast genome sequence is: A of 30.7%, T of 32.0%, C of 19.0% and G of 18.3%. The total of 116 genes were successfully annotated, which contained 83 protein-coding genes, 29 transfer RNA genes, and 4 ribosomal RNA genes. The ML phylogenetic analysis result showed that T. wallichiana was closely related to Taxus baccata in the phylogenetic relationship using the neighbour-joining (NJ) method in this study.
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spelling pubmed-76715942020-12-22 Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China Ruan, Tian Tan, Ruijing Ma, WenJie Li, Minghang Zheng, Xuyi He, Lifen Mitochondrial DNA B Resour Mitogenome Announcement Taxus wallichiana is a member of the family Taxaceae, which is a unique and endangered species in China and is widely used for ornamental, material and medicinal purposes. The complete chloroplast genome of T. wallichiana was found to possess a total size of 128,168 bp. The GC content of T. wallichiana chloroplast genome sequence is 37.3%, the overall nucleotide composition of chloroplast genome sequence is: A of 30.7%, T of 32.0%, C of 19.0% and G of 18.3%. The total of 116 genes were successfully annotated, which contained 83 protein-coding genes, 29 transfer RNA genes, and 4 ribosomal RNA genes. The ML phylogenetic analysis result showed that T. wallichiana was closely related to Taxus baccata in the phylogenetic relationship using the neighbour-joining (NJ) method in this study. Taylor & Francis 2020-11-11 /pmc/articles/PMC7671594/ /pubmed/33367097 http://dx.doi.org/10.1080/23802359.2020.1799725 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ruan, Tian
Tan, Ruijing
Ma, WenJie
Li, Minghang
Zheng, Xuyi
He, Lifen
Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China
title Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China
title_full Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China
title_fullStr Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China
title_full_unstemmed Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China
title_short Characterization of the complete chloroplast genome of Taxus wallichiana as the medicinal plant from China
title_sort characterization of the complete chloroplast genome of taxus wallichiana as the medicinal plant from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671594/
https://www.ncbi.nlm.nih.gov/pubmed/33367097
http://dx.doi.org/10.1080/23802359.2020.1799725
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