The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution

Vatica guangxiensis S.L. Mo is an evergreen large tree of Dipterocarpaceae. Herein, we assembled the complete chloroplast genome of Vatica guangxiensis by next-generation sequencing technologies. The complete chloroplast genome sequence of Vatica guangxiensis is 151,010 base pairs (bp) in length, in...

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Autores principales: Deng, Li-Li, Qin, Hui-Zhen, Shi, Yan-Cai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671599/
https://www.ncbi.nlm.nih.gov/pubmed/33367086
http://dx.doi.org/10.1080/23802359.2020.1835580
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author Deng, Li-Li
Qin, Hui-Zhen
Shi, Yan-Cai
author_facet Deng, Li-Li
Qin, Hui-Zhen
Shi, Yan-Cai
author_sort Deng, Li-Li
collection PubMed
description Vatica guangxiensis S.L. Mo is an evergreen large tree of Dipterocarpaceae. Herein, we assembled the complete chloroplast genome of Vatica guangxiensis by next-generation sequencing technologies. The complete chloroplast genome sequence of Vatica guangxiensis is 151,010 base pairs (bp) in length, including a pair of inverted repeat regions (IRs, 23,827 bp), one large single-copy region (LSC, 83,353 bp), one small single-copy region (SSC, 20,003 bp). Besides, the complete chloroplast genome contains 123 genes in total, including 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that Vatica guangxiensis has the closest relationship with Vatica mangachapoi. Our study lay a foundation for further research of Vatica mangachapoi.
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spelling pubmed-76715992020-12-22 The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution Deng, Li-Li Qin, Hui-Zhen Shi, Yan-Cai Mitochondrial DNA B Resour Mitogenome Announcement Vatica guangxiensis S.L. Mo is an evergreen large tree of Dipterocarpaceae. Herein, we assembled the complete chloroplast genome of Vatica guangxiensis by next-generation sequencing technologies. The complete chloroplast genome sequence of Vatica guangxiensis is 151,010 base pairs (bp) in length, including a pair of inverted repeat regions (IRs, 23,827 bp), one large single-copy region (LSC, 83,353 bp), one small single-copy region (SSC, 20,003 bp). Besides, the complete chloroplast genome contains 123 genes in total, including 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that Vatica guangxiensis has the closest relationship with Vatica mangachapoi. Our study lay a foundation for further research of Vatica mangachapoi. Taylor & Francis 2020-11-13 /pmc/articles/PMC7671599/ /pubmed/33367086 http://dx.doi.org/10.1080/23802359.2020.1835580 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Deng, Li-Li
Qin, Hui-Zhen
Shi, Yan-Cai
The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution
title The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution
title_full The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution
title_fullStr The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution
title_full_unstemmed The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution
title_short The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution
title_sort complete chloroplast genome of vatica guangxiensis s.l. mo (dipterocarpaceae): genome structure and evolution
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671599/
https://www.ncbi.nlm.nih.gov/pubmed/33367086
http://dx.doi.org/10.1080/23802359.2020.1835580
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