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Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb

Murraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. panicula...

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Detalles Bibliográficos
Autores principales: Liu, Huihui, Zhao, Yuyang, Zhou, Junhui, Ma, Qing, Wang, Xinhong, Hua, Zhongyi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671698/
https://www.ncbi.nlm.nih.gov/pubmed/33367064
http://dx.doi.org/10.1080/23802359.2020.1829518
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author Liu, Huihui
Zhao, Yuyang
Zhou, Junhui
Ma, Qing
Wang, Xinhong
Hua, Zhongyi
author_facet Liu, Huihui
Zhao, Yuyang
Zhou, Junhui
Ma, Qing
Wang, Xinhong
Hua, Zhongyi
author_sort Liu, Huihui
collection PubMed
description Murraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. paniculata is 160,280 bp in length consisting of large and small single-copy regions of length 87,605 and 18,609 bp, separated by two IR regions of 27,033 bp. The overall GC content was 38.61%. De novo assembly and annotation showed the presence of unique genes with 85 protein-coding genes, 29 tRNA genes, and eight rRNA genes. A maximum-likelihood phylogenomic analysis showed that M. paniculata was closely related to M. caloxylon.
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spelling pubmed-76716982020-12-22 Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb Liu, Huihui Zhao, Yuyang Zhou, Junhui Ma, Qing Wang, Xinhong Hua, Zhongyi Mitochondrial DNA B Resour Mitogenome Announcement Murraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. paniculata is 160,280 bp in length consisting of large and small single-copy regions of length 87,605 and 18,609 bp, separated by two IR regions of 27,033 bp. The overall GC content was 38.61%. De novo assembly and annotation showed the presence of unique genes with 85 protein-coding genes, 29 tRNA genes, and eight rRNA genes. A maximum-likelihood phylogenomic analysis showed that M. paniculata was closely related to M. caloxylon. Taylor & Francis 2020-11-11 /pmc/articles/PMC7671698/ /pubmed/33367064 http://dx.doi.org/10.1080/23802359.2020.1829518 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Huihui
Zhao, Yuyang
Zhou, Junhui
Ma, Qing
Wang, Xinhong
Hua, Zhongyi
Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
title Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
title_full Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
title_fullStr Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
title_full_unstemmed Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
title_short Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
title_sort complete chloroplast genome sequence of murraya paniculata (rutaceae): a widely used folk medicinal herb
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671698/
https://www.ncbi.nlm.nih.gov/pubmed/33367064
http://dx.doi.org/10.1080/23802359.2020.1829518
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