Cargando…

The complete chloroplast genome sequence of Knema conferta (Myristicaceae)

Knema conferta is a member of Myristicaceae. The K. conferta chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Feng-Liang, Yang, Tian, Mao, Chang-Li, Li, Xiao-Qin, Zhao, Qi, Wu, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671699/
https://www.ncbi.nlm.nih.gov/pubmed/33367085
http://dx.doi.org/10.1080/23802359.2020.1835574
_version_ 1783610976774389760
author Zhang, Feng-Liang
Yang, Tian
Mao, Chang-Li
Li, Xiao-Qin
Zhao, Qi
Wu, Yu
author_facet Zhang, Feng-Liang
Yang, Tian
Mao, Chang-Li
Li, Xiao-Qin
Zhao, Qi
Wu, Yu
author_sort Zhang, Feng-Liang
collection PubMed
description Knema conferta is a member of Myristicaceae. The K. conferta chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,926 bp) and a small single copy (SSC) region (20,770 bp). The genome encoded a total of 128 unigenes, including 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. conferta was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. conferta.
format Online
Article
Text
id pubmed-7671699
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-76716992020-12-22 The complete chloroplast genome sequence of Knema conferta (Myristicaceae) Zhang, Feng-Liang Yang, Tian Mao, Chang-Li Li, Xiao-Qin Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Knema conferta is a member of Myristicaceae. The K. conferta chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,926 bp) and a small single copy (SSC) region (20,770 bp). The genome encoded a total of 128 unigenes, including 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. conferta was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. conferta. Taylor & Francis 2020-11-13 /pmc/articles/PMC7671699/ /pubmed/33367085 http://dx.doi.org/10.1080/23802359.2020.1835574 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Feng-Liang
Yang, Tian
Mao, Chang-Li
Li, Xiao-Qin
Zhao, Qi
Wu, Yu
The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
title The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
title_full The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
title_fullStr The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
title_short The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
title_sort complete chloroplast genome sequence of knema conferta (myristicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671699/
https://www.ncbi.nlm.nih.gov/pubmed/33367085
http://dx.doi.org/10.1080/23802359.2020.1835574
work_keys_str_mv AT zhangfengliang thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae
AT yangtian thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae
AT maochangli thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae
AT lixiaoqin thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae
AT zhaoqi thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae
AT wuyu thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae
AT zhangfengliang completechloroplastgenomesequenceofknemaconfertamyristicaceae
AT yangtian completechloroplastgenomesequenceofknemaconfertamyristicaceae
AT maochangli completechloroplastgenomesequenceofknemaconfertamyristicaceae
AT lixiaoqin completechloroplastgenomesequenceofknemaconfertamyristicaceae
AT zhaoqi completechloroplastgenomesequenceofknemaconfertamyristicaceae
AT wuyu completechloroplastgenomesequenceofknemaconfertamyristicaceae