Cargando…
The complete chloroplast genome sequence of Knema conferta (Myristicaceae)
Knema conferta is a member of Myristicaceae. The K. conferta chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671699/ https://www.ncbi.nlm.nih.gov/pubmed/33367085 http://dx.doi.org/10.1080/23802359.2020.1835574 |
_version_ | 1783610976774389760 |
---|---|
author | Zhang, Feng-Liang Yang, Tian Mao, Chang-Li Li, Xiao-Qin Zhao, Qi Wu, Yu |
author_facet | Zhang, Feng-Liang Yang, Tian Mao, Chang-Li Li, Xiao-Qin Zhao, Qi Wu, Yu |
author_sort | Zhang, Feng-Liang |
collection | PubMed |
description | Knema conferta is a member of Myristicaceae. The K. conferta chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,926 bp) and a small single copy (SSC) region (20,770 bp). The genome encoded a total of 128 unigenes, including 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. conferta was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. conferta. |
format | Online Article Text |
id | pubmed-7671699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76716992020-12-22 The complete chloroplast genome sequence of Knema conferta (Myristicaceae) Zhang, Feng-Liang Yang, Tian Mao, Chang-Li Li, Xiao-Qin Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Knema conferta is a member of Myristicaceae. The K. conferta chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,926 bp) and a small single copy (SSC) region (20,770 bp). The genome encoded a total of 128 unigenes, including 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. conferta was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. conferta. Taylor & Francis 2020-11-13 /pmc/articles/PMC7671699/ /pubmed/33367085 http://dx.doi.org/10.1080/23802359.2020.1835574 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Feng-Liang Yang, Tian Mao, Chang-Li Li, Xiao-Qin Zhao, Qi Wu, Yu The complete chloroplast genome sequence of Knema conferta (Myristicaceae) |
title | The complete chloroplast genome sequence of Knema conferta (Myristicaceae) |
title_full | The complete chloroplast genome sequence of Knema conferta (Myristicaceae) |
title_fullStr | The complete chloroplast genome sequence of Knema conferta (Myristicaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Knema conferta (Myristicaceae) |
title_short | The complete chloroplast genome sequence of Knema conferta (Myristicaceae) |
title_sort | complete chloroplast genome sequence of knema conferta (myristicaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671699/ https://www.ncbi.nlm.nih.gov/pubmed/33367085 http://dx.doi.org/10.1080/23802359.2020.1835574 |
work_keys_str_mv | AT zhangfengliang thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae AT yangtian thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae AT maochangli thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae AT lixiaoqin thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae AT zhaoqi thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae AT wuyu thecompletechloroplastgenomesequenceofknemaconfertamyristicaceae AT zhangfengliang completechloroplastgenomesequenceofknemaconfertamyristicaceae AT yangtian completechloroplastgenomesequenceofknemaconfertamyristicaceae AT maochangli completechloroplastgenomesequenceofknemaconfertamyristicaceae AT lixiaoqin completechloroplastgenomesequenceofknemaconfertamyristicaceae AT zhaoqi completechloroplastgenomesequenceofknemaconfertamyristicaceae AT wuyu completechloroplastgenomesequenceofknemaconfertamyristicaceae |