Cargando…
Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae)
The two complete mitochondrial genomes were sequenced from the freshwater monogonont rotifer Brachionus angularis. The mitochondrial genome sequences were 10,764 bp (mitochondrial DNA I) and 12,238 bp (mitochondrial DNA II) in size, respectively. The gene structure and its orientation of 12 protein-...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671714/ https://www.ncbi.nlm.nih.gov/pubmed/33367088 http://dx.doi.org/10.1080/23802359.2020.1835578 |
_version_ | 1783610979797434368 |
---|---|
author | Kim, Min-Sub Choi, Beom-Soon Ogello, Erick Ochieng Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong |
author_facet | Kim, Min-Sub Choi, Beom-Soon Ogello, Erick Ochieng Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong |
author_sort | Kim, Min-Sub |
collection | PubMed |
description | The two complete mitochondrial genomes were sequenced from the freshwater monogonont rotifer Brachionus angularis. The mitochondrial genome sequences were 10,764 bp (mitochondrial DNA I) and 12,238 bp (mitochondrial DNA II) in size, respectively. The gene structure and its orientation of 12 protein-coding genes (PCGs) of complete mitochondrial genomes of B. angularis was identical to those shown in other marine rotifers and the freshwater rotifer Brachionus rubens, but was different from the freshwater rotifer Brachionus calyciflorus. Of 12 PCGs, one gene (ND5) had incomplete stop codon. Furthermore, the start codon for CO1, ND4L, ND5, and CO2 was GTG, while the start codon for ND3 and other PCGs was ATA and ATG, respectively. The base composition of 12 PCGs in B. angularis mitogenome showed 20.4% for A, 47.3% for T, 17.5% for C, and 14.8% for G, respectively. The mitochondrial genome A + T base composition (67.7%) of 12 PCGs was higher than G + C (32.3%), while the complete mitochondrial genome A + T base composition (66.3%) was higher than G + C (33.7%). |
format | Online Article Text |
id | pubmed-7671714 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76717142020-12-22 Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) Kim, Min-Sub Choi, Beom-Soon Ogello, Erick Ochieng Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Mitochondrial DNA B Resour Mitogenome Announcement The two complete mitochondrial genomes were sequenced from the freshwater monogonont rotifer Brachionus angularis. The mitochondrial genome sequences were 10,764 bp (mitochondrial DNA I) and 12,238 bp (mitochondrial DNA II) in size, respectively. The gene structure and its orientation of 12 protein-coding genes (PCGs) of complete mitochondrial genomes of B. angularis was identical to those shown in other marine rotifers and the freshwater rotifer Brachionus rubens, but was different from the freshwater rotifer Brachionus calyciflorus. Of 12 PCGs, one gene (ND5) had incomplete stop codon. Furthermore, the start codon for CO1, ND4L, ND5, and CO2 was GTG, while the start codon for ND3 and other PCGs was ATA and ATG, respectively. The base composition of 12 PCGs in B. angularis mitogenome showed 20.4% for A, 47.3% for T, 17.5% for C, and 14.8% for G, respectively. The mitochondrial genome A + T base composition (67.7%) of 12 PCGs was higher than G + C (32.3%), while the complete mitochondrial genome A + T base composition (66.3%) was higher than G + C (33.7%). Taylor & Francis 2020-11-13 /pmc/articles/PMC7671714/ /pubmed/33367088 http://dx.doi.org/10.1080/23802359.2020.1835578 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Kim, Min-Sub Choi, Beom-Soon Ogello, Erick Ochieng Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
title | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
title_full | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
title_fullStr | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
title_full_unstemmed | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
title_short | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
title_sort | complete mitochondrial genome of the freshwater monogonont rotifer brachionus angularis (rotifera, brachionidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671714/ https://www.ncbi.nlm.nih.gov/pubmed/33367088 http://dx.doi.org/10.1080/23802359.2020.1835578 |
work_keys_str_mv | AT kimminsub completemitochondrialgenomeofthefreshwatermonogonontrotiferbrachionusangularisrotiferabrachionidae AT choibeomsoon completemitochondrialgenomeofthefreshwatermonogonontrotiferbrachionusangularisrotiferabrachionidae AT ogelloerickochieng completemitochondrialgenomeofthefreshwatermonogonontrotiferbrachionusangularisrotiferabrachionidae AT kimheejin completemitochondrialgenomeofthefreshwatermonogonontrotiferbrachionusangularisrotiferabrachionidae AT hagiwaraatsushi completemitochondrialgenomeofthefreshwatermonogonontrotiferbrachionusangularisrotiferabrachionidae AT leejaeseong completemitochondrialgenomeofthefreshwatermonogonontrotiferbrachionusangularisrotiferabrachionidae |