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An online coronavirus analysis platform from the National Genomics Data Center

Since the first reported severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection in December 2019, coronavirus disease 2019 (COVID-19) has become a global pandemic, spreading to more than 200 countries and regions worldwide. With continued research progress and virus detection, SARS-C...

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Autores principales: Gong, Zheng, Zhu, Jun-Wei, Li, Cui-Ping, Jiang, Shuai, Ma, Li-Na, Tang, Bi-Xia, Zou, Dong, Chen, Mei-Li, Sun, Yu-Bin, Song, Shu-Hui, Zhang, Zhang, Xiao, Jing-Fa, Xue, Yong-Biao, Bao, Yi-Ming, Du, Zheng-Lin, Zhao, Wen-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Science Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671910/
https://www.ncbi.nlm.nih.gov/pubmed/33045776
http://dx.doi.org/10.24272/j.issn.2095-8137.2020.065
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author Gong, Zheng
Zhu, Jun-Wei
Li, Cui-Ping
Jiang, Shuai
Ma, Li-Na
Tang, Bi-Xia
Zou, Dong
Chen, Mei-Li
Sun, Yu-Bin
Song, Shu-Hui
Zhang, Zhang
Xiao, Jing-Fa
Xue, Yong-Biao
Bao, Yi-Ming
Du, Zheng-Lin
Zhao, Wen-Ming
author_facet Gong, Zheng
Zhu, Jun-Wei
Li, Cui-Ping
Jiang, Shuai
Ma, Li-Na
Tang, Bi-Xia
Zou, Dong
Chen, Mei-Li
Sun, Yu-Bin
Song, Shu-Hui
Zhang, Zhang
Xiao, Jing-Fa
Xue, Yong-Biao
Bao, Yi-Ming
Du, Zheng-Lin
Zhao, Wen-Ming
author_sort Gong, Zheng
collection PubMed
description Since the first reported severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection in December 2019, coronavirus disease 2019 (COVID-19) has become a global pandemic, spreading to more than 200 countries and regions worldwide. With continued research progress and virus detection, SARS-CoV-2 genomes and sequencing data have been reported and accumulated at an unprecedented rate. To meet the need for fast analysis of these genome sequences, the National Genomics Data Center (NGDC) of the China National Center for Bioinformation (CNCB) has established an online coronavirus analysis platform, which includes de novoassembly, BLAST alignment, genome annotation, variant identification, and variant annotation modules. The online analysis platform can be freely accessed at the 2019 Novel Coronavirus Resource (2019nCoVR) (https://bigd.big.ac.cn/ncov/online/tools).
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spelling pubmed-76719102020-11-20 An online coronavirus analysis platform from the National Genomics Data Center Gong, Zheng Zhu, Jun-Wei Li, Cui-Ping Jiang, Shuai Ma, Li-Na Tang, Bi-Xia Zou, Dong Chen, Mei-Li Sun, Yu-Bin Song, Shu-Hui Zhang, Zhang Xiao, Jing-Fa Xue, Yong-Biao Bao, Yi-Ming Du, Zheng-Lin Zhao, Wen-Ming Zool Res Letters to the Editor Since the first reported severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection in December 2019, coronavirus disease 2019 (COVID-19) has become a global pandemic, spreading to more than 200 countries and regions worldwide. With continued research progress and virus detection, SARS-CoV-2 genomes and sequencing data have been reported and accumulated at an unprecedented rate. To meet the need for fast analysis of these genome sequences, the National Genomics Data Center (NGDC) of the China National Center for Bioinformation (CNCB) has established an online coronavirus analysis platform, which includes de novoassembly, BLAST alignment, genome annotation, variant identification, and variant annotation modules. The online analysis platform can be freely accessed at the 2019 Novel Coronavirus Resource (2019nCoVR) (https://bigd.big.ac.cn/ncov/online/tools). Science Press 2020-11-18 /pmc/articles/PMC7671910/ /pubmed/33045776 http://dx.doi.org/10.24272/j.issn.2095-8137.2020.065 Text en Editorial Office of Zoological Research, Kunming Institute of Zoology, Chinese Academy of Sciences http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Letters to the Editor
Gong, Zheng
Zhu, Jun-Wei
Li, Cui-Ping
Jiang, Shuai
Ma, Li-Na
Tang, Bi-Xia
Zou, Dong
Chen, Mei-Li
Sun, Yu-Bin
Song, Shu-Hui
Zhang, Zhang
Xiao, Jing-Fa
Xue, Yong-Biao
Bao, Yi-Ming
Du, Zheng-Lin
Zhao, Wen-Ming
An online coronavirus analysis platform from the National Genomics Data Center
title An online coronavirus analysis platform from the National Genomics Data Center
title_full An online coronavirus analysis platform from the National Genomics Data Center
title_fullStr An online coronavirus analysis platform from the National Genomics Data Center
title_full_unstemmed An online coronavirus analysis platform from the National Genomics Data Center
title_short An online coronavirus analysis platform from the National Genomics Data Center
title_sort online coronavirus analysis platform from the national genomics data center
topic Letters to the Editor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7671910/
https://www.ncbi.nlm.nih.gov/pubmed/33045776
http://dx.doi.org/10.24272/j.issn.2095-8137.2020.065
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