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Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer
BACKGROUND: Besides being one of the most prevalent cancers among women, incidence and mortality rates of endometrial cancer (EC) are still increasing. The E2F family of transcriptional factors is involved in cell differentiation, apoptosis, and inhibition of DNA damage response, thus affecting grow...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7672218/ https://www.ncbi.nlm.nih.gov/pubmed/33329696 http://dx.doi.org/10.3389/fgene.2020.557188 |
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author | Zhang, YunZheng Wang, Zihao Ma, Jian Huo, JiaNing Li, YiBing Wang, YuShan Chen, Hao Shan, LuHe Ma, Xiaoxin |
author_facet | Zhang, YunZheng Wang, Zihao Ma, Jian Huo, JiaNing Li, YiBing Wang, YuShan Chen, Hao Shan, LuHe Ma, Xiaoxin |
author_sort | Zhang, YunZheng |
collection | PubMed |
description | BACKGROUND: Besides being one of the most prevalent cancers among women, incidence and mortality rates of endometrial cancer (EC) are still increasing. The E2F family of transcriptional factors is involved in cell differentiation, apoptosis, and inhibition of DNA damage response, thus affecting growth and invasion of tumor cells. METHODS: We used multiple bioinformatics tools to explore the role of E2F family in endometrial cancer. RESULTS: The expression of E2F1/2/3/7/8 was significantly upregulated in endometrial cancer tissues, converse to E2F4, which was downregulated. Methylation downregulates all E2Fs except for E2F2. Accordingly, E2F1/2/3/5/7/8 are potential diagnostic biomarkers for EC. In particular, EC patients displaying upregulated E2F1, and E2F3 expression had a worse overall survival and relapse-free survival. E2F8, E2F7, and E2F1 were the top three, most-frequently altered genes in endometrial cancer. E2F family activates apoptosis pathways, regulates cell cycle, and impairs DNA damage response pathways. Drug-sensitivity analysis demonstrated that the level of E2F2/3/8 negatively correlated with drug resistance. Meanwhile, immune infiltrations analysis revealed that E2F family is associated with recruitment of several immune cells. Enrichment analysis on its part revealed that the E2F family is mainly associated with cell cycle, sequence-specific DNA binding, nuclear transcription factor complex, PI3K-Akt signaling, and p53 signaling pathway. We also identified multiple E2Fs-associated miRNA and kinase targets in endometrial cancer. CONCLUSION: Our study revealed the unique expression signature and clinical significance of E2F family in EC, demonstrating the potential clinical utility of these transcription factors (TF) in endometrial cancer. |
format | Online Article Text |
id | pubmed-7672218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76722182020-12-15 Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer Zhang, YunZheng Wang, Zihao Ma, Jian Huo, JiaNing Li, YiBing Wang, YuShan Chen, Hao Shan, LuHe Ma, Xiaoxin Front Genet Genetics BACKGROUND: Besides being one of the most prevalent cancers among women, incidence and mortality rates of endometrial cancer (EC) are still increasing. The E2F family of transcriptional factors is involved in cell differentiation, apoptosis, and inhibition of DNA damage response, thus affecting growth and invasion of tumor cells. METHODS: We used multiple bioinformatics tools to explore the role of E2F family in endometrial cancer. RESULTS: The expression of E2F1/2/3/7/8 was significantly upregulated in endometrial cancer tissues, converse to E2F4, which was downregulated. Methylation downregulates all E2Fs except for E2F2. Accordingly, E2F1/2/3/5/7/8 are potential diagnostic biomarkers for EC. In particular, EC patients displaying upregulated E2F1, and E2F3 expression had a worse overall survival and relapse-free survival. E2F8, E2F7, and E2F1 were the top three, most-frequently altered genes in endometrial cancer. E2F family activates apoptosis pathways, regulates cell cycle, and impairs DNA damage response pathways. Drug-sensitivity analysis demonstrated that the level of E2F2/3/8 negatively correlated with drug resistance. Meanwhile, immune infiltrations analysis revealed that E2F family is associated with recruitment of several immune cells. Enrichment analysis on its part revealed that the E2F family is mainly associated with cell cycle, sequence-specific DNA binding, nuclear transcription factor complex, PI3K-Akt signaling, and p53 signaling pathway. We also identified multiple E2Fs-associated miRNA and kinase targets in endometrial cancer. CONCLUSION: Our study revealed the unique expression signature and clinical significance of E2F family in EC, demonstrating the potential clinical utility of these transcription factors (TF) in endometrial cancer. Frontiers Media S.A. 2020-11-04 /pmc/articles/PMC7672218/ /pubmed/33329696 http://dx.doi.org/10.3389/fgene.2020.557188 Text en Copyright © 2020 Zhang, Wang, Ma, Huo, Li, Wang, Chen, Shan and Ma. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Zhang, YunZheng Wang, Zihao Ma, Jian Huo, JiaNing Li, YiBing Wang, YuShan Chen, Hao Shan, LuHe Ma, Xiaoxin Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer |
title | Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer |
title_full | Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer |
title_fullStr | Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer |
title_full_unstemmed | Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer |
title_short | Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer |
title_sort | bioinformatics identification of the expression and clinical significance of e2f family in endometrial cancer |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7672218/ https://www.ncbi.nlm.nih.gov/pubmed/33329696 http://dx.doi.org/10.3389/fgene.2020.557188 |
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