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Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach

BACKGROUND: Most of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. OBJECTIVE: This study aimed to develop an effective prediction model for COVID-19 severity b...

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Detalles Bibliográficos
Autores principales: Li, Daowei, Zhang, Qiang, Tan, Yue, Feng, Xinghuo, Yue, Yuanyi, Bai, Yuhan, Li, Jimeng, Li, Jiahang, Xu, Youjun, Chen, Shiyu, Xiao, Si-Yu, Sun, Muyan, Li, Xiaona, Zhu, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7674140/
https://www.ncbi.nlm.nih.gov/pubmed/33038076
http://dx.doi.org/10.2196/21604
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author Li, Daowei
Zhang, Qiang
Tan, Yue
Feng, Xinghuo
Yue, Yuanyi
Bai, Yuhan
Li, Jimeng
Li, Jiahang
Xu, Youjun
Chen, Shiyu
Xiao, Si-Yu
Sun, Muyan
Li, Xiaona
Zhu, Fang
author_facet Li, Daowei
Zhang, Qiang
Tan, Yue
Feng, Xinghuo
Yue, Yuanyi
Bai, Yuhan
Li, Jimeng
Li, Jiahang
Xu, Youjun
Chen, Shiyu
Xiao, Si-Yu
Sun, Muyan
Li, Xiaona
Zhu, Fang
author_sort Li, Daowei
collection PubMed
description BACKGROUND: Most of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. OBJECTIVE: This study aimed to develop an effective prediction model for COVID-19 severity by combining radiological outcome with clinical biochemical indexes. METHODS: A total of 46 patients with COVID-19 (10 severe, 36 nonsevere) were examined. To build the prediction model, a set of 27 severe and 151 nonsevere clinical laboratory records and computerized tomography (CT) records were collected from these patients. We managed to extract specific features from the patients’ CT images by using a recently published convolutional neural network. We also trained a machine learning model combining these features with clinical laboratory results. RESULTS: We present a prediction model combining patients’ radiological outcomes with their clinical biochemical indexes to identify severe COVID-19 cases. The prediction model yielded a cross-validated area under the receiver operating characteristic (AUROC) score of 0.93 and an F(1) score of 0.89, which showed a 6% and 15% improvement, respectively, compared to the models based on laboratory test features only. In addition, we developed a statistical model for forecasting COVID-19 severity based on the results of patients’ laboratory tests performed before they were classified as severe cases; this model yielded an AUROC score of 0.81. CONCLUSIONS: To our knowledge, this is the first report predicting the clinical progression of COVID-19, as well as forecasting severity, based on a combined analysis using laboratory tests and CT images.
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spelling pubmed-76741402020-11-20 Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach Li, Daowei Zhang, Qiang Tan, Yue Feng, Xinghuo Yue, Yuanyi Bai, Yuhan Li, Jimeng Li, Jiahang Xu, Youjun Chen, Shiyu Xiao, Si-Yu Sun, Muyan Li, Xiaona Zhu, Fang JMIR Med Inform Original Paper BACKGROUND: Most of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. OBJECTIVE: This study aimed to develop an effective prediction model for COVID-19 severity by combining radiological outcome with clinical biochemical indexes. METHODS: A total of 46 patients with COVID-19 (10 severe, 36 nonsevere) were examined. To build the prediction model, a set of 27 severe and 151 nonsevere clinical laboratory records and computerized tomography (CT) records were collected from these patients. We managed to extract specific features from the patients’ CT images by using a recently published convolutional neural network. We also trained a machine learning model combining these features with clinical laboratory results. RESULTS: We present a prediction model combining patients’ radiological outcomes with their clinical biochemical indexes to identify severe COVID-19 cases. The prediction model yielded a cross-validated area under the receiver operating characteristic (AUROC) score of 0.93 and an F(1) score of 0.89, which showed a 6% and 15% improvement, respectively, compared to the models based on laboratory test features only. In addition, we developed a statistical model for forecasting COVID-19 severity based on the results of patients’ laboratory tests performed before they were classified as severe cases; this model yielded an AUROC score of 0.81. CONCLUSIONS: To our knowledge, this is the first report predicting the clinical progression of COVID-19, as well as forecasting severity, based on a combined analysis using laboratory tests and CT images. JMIR Publications 2020-11-17 /pmc/articles/PMC7674140/ /pubmed/33038076 http://dx.doi.org/10.2196/21604 Text en ©Daowei Li, Qiang Zhang, Yue Tan, Xinghuo Feng, Yuanyi Yue, Yuhan Bai, Jimeng Li, Jiahang Li, Youjun Xu, Shiyu Chen, Si-Yu Xiao, Muyan Sun, Xiaona Li, Fang Zhu. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 17.11.2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Li, Daowei
Zhang, Qiang
Tan, Yue
Feng, Xinghuo
Yue, Yuanyi
Bai, Yuhan
Li, Jimeng
Li, Jiahang
Xu, Youjun
Chen, Shiyu
Xiao, Si-Yu
Sun, Muyan
Li, Xiaona
Zhu, Fang
Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_full Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_fullStr Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_full_unstemmed Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_short Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_sort prediction of covid-19 severity using chest computed tomography and laboratory measurements: evaluation using a machine learning approach
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7674140/
https://www.ncbi.nlm.nih.gov/pubmed/33038076
http://dx.doi.org/10.2196/21604
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