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Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
BACKGROUND: Most of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. OBJECTIVE: This study aimed to develop an effective prediction model for COVID-19 severity b...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7674140/ https://www.ncbi.nlm.nih.gov/pubmed/33038076 http://dx.doi.org/10.2196/21604 |
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author | Li, Daowei Zhang, Qiang Tan, Yue Feng, Xinghuo Yue, Yuanyi Bai, Yuhan Li, Jimeng Li, Jiahang Xu, Youjun Chen, Shiyu Xiao, Si-Yu Sun, Muyan Li, Xiaona Zhu, Fang |
author_facet | Li, Daowei Zhang, Qiang Tan, Yue Feng, Xinghuo Yue, Yuanyi Bai, Yuhan Li, Jimeng Li, Jiahang Xu, Youjun Chen, Shiyu Xiao, Si-Yu Sun, Muyan Li, Xiaona Zhu, Fang |
author_sort | Li, Daowei |
collection | PubMed |
description | BACKGROUND: Most of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. OBJECTIVE: This study aimed to develop an effective prediction model for COVID-19 severity by combining radiological outcome with clinical biochemical indexes. METHODS: A total of 46 patients with COVID-19 (10 severe, 36 nonsevere) were examined. To build the prediction model, a set of 27 severe and 151 nonsevere clinical laboratory records and computerized tomography (CT) records were collected from these patients. We managed to extract specific features from the patients’ CT images by using a recently published convolutional neural network. We also trained a machine learning model combining these features with clinical laboratory results. RESULTS: We present a prediction model combining patients’ radiological outcomes with their clinical biochemical indexes to identify severe COVID-19 cases. The prediction model yielded a cross-validated area under the receiver operating characteristic (AUROC) score of 0.93 and an F(1) score of 0.89, which showed a 6% and 15% improvement, respectively, compared to the models based on laboratory test features only. In addition, we developed a statistical model for forecasting COVID-19 severity based on the results of patients’ laboratory tests performed before they were classified as severe cases; this model yielded an AUROC score of 0.81. CONCLUSIONS: To our knowledge, this is the first report predicting the clinical progression of COVID-19, as well as forecasting severity, based on a combined analysis using laboratory tests and CT images. |
format | Online Article Text |
id | pubmed-7674140 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-76741402020-11-20 Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach Li, Daowei Zhang, Qiang Tan, Yue Feng, Xinghuo Yue, Yuanyi Bai, Yuhan Li, Jimeng Li, Jiahang Xu, Youjun Chen, Shiyu Xiao, Si-Yu Sun, Muyan Li, Xiaona Zhu, Fang JMIR Med Inform Original Paper BACKGROUND: Most of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. OBJECTIVE: This study aimed to develop an effective prediction model for COVID-19 severity by combining radiological outcome with clinical biochemical indexes. METHODS: A total of 46 patients with COVID-19 (10 severe, 36 nonsevere) were examined. To build the prediction model, a set of 27 severe and 151 nonsevere clinical laboratory records and computerized tomography (CT) records were collected from these patients. We managed to extract specific features from the patients’ CT images by using a recently published convolutional neural network. We also trained a machine learning model combining these features with clinical laboratory results. RESULTS: We present a prediction model combining patients’ radiological outcomes with their clinical biochemical indexes to identify severe COVID-19 cases. The prediction model yielded a cross-validated area under the receiver operating characteristic (AUROC) score of 0.93 and an F(1) score of 0.89, which showed a 6% and 15% improvement, respectively, compared to the models based on laboratory test features only. In addition, we developed a statistical model for forecasting COVID-19 severity based on the results of patients’ laboratory tests performed before they were classified as severe cases; this model yielded an AUROC score of 0.81. CONCLUSIONS: To our knowledge, this is the first report predicting the clinical progression of COVID-19, as well as forecasting severity, based on a combined analysis using laboratory tests and CT images. JMIR Publications 2020-11-17 /pmc/articles/PMC7674140/ /pubmed/33038076 http://dx.doi.org/10.2196/21604 Text en ©Daowei Li, Qiang Zhang, Yue Tan, Xinghuo Feng, Yuanyi Yue, Yuhan Bai, Jimeng Li, Jiahang Li, Youjun Xu, Shiyu Chen, Si-Yu Xiao, Muyan Sun, Xiaona Li, Fang Zhu. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 17.11.2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Li, Daowei Zhang, Qiang Tan, Yue Feng, Xinghuo Yue, Yuanyi Bai, Yuhan Li, Jimeng Li, Jiahang Xu, Youjun Chen, Shiyu Xiao, Si-Yu Sun, Muyan Li, Xiaona Zhu, Fang Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach |
title | Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach |
title_full | Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach |
title_fullStr | Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach |
title_full_unstemmed | Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach |
title_short | Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach |
title_sort | prediction of covid-19 severity using chest computed tomography and laboratory measurements: evaluation using a machine learning approach |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7674140/ https://www.ncbi.nlm.nih.gov/pubmed/33038076 http://dx.doi.org/10.2196/21604 |
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