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Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis
The study aims to characterize the circular RNA (circRNA) expression profile that is functionally related with the invasiveness of papillary thyroid microcarcinoma (PTMC). A total of 13 pairs of female patients with non-invasive PTMC or lymph node metastasis PTMC (PTMC (L)) were included and the ser...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7676571/ https://www.ncbi.nlm.nih.gov/pubmed/33217846 http://dx.doi.org/10.1097/MD.0000000000023255 |
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author | Yang, Wenwen Bai, Chao Zhang, Li Li, Zongbao Tian, Ye Yang, Zhenwei Wang, Liang Wu, Wennian |
author_facet | Yang, Wenwen Bai, Chao Zhang, Li Li, Zongbao Tian, Ye Yang, Zhenwei Wang, Liang Wu, Wennian |
author_sort | Yang, Wenwen |
collection | PubMed |
description | The study aims to characterize the circular RNA (circRNA) expression profile that is functionally related with the invasiveness of papillary thyroid microcarcinoma (PTMC). A total of 13 pairs of female patients with non-invasive PTMC or lymph node metastasis PTMC (PTMC (L)) were included and the serum RNA was obtained. CircRNA microarray was performed to identify the circRNA expression profile. Real time-PCR was used to verify circRNA expression. Bioinformatic approaches were adopted to annotate the function of differentially expressed circRNAs and construct the circRNA-miRNA-mRNA network. In total, 400 significantly upregulated and 290 significantly downregulated circRNAs were identified in PTMC (L) compared with PTMC. Among them, 10 circRNAs were selected and validated by real time-PCR. Putative microRNAs (miRNAs) that could bind to the differentially expressed circRNAs were predicted. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses of target genes of the differentially expressed circRNAs revealed that these circRNAs may play an important role in lymph node metastasis. Finally, circRNA targeted miRNAs were predicted and a circRNA-miRNA-mRNA network was constructed for hsa_circRNA_404686. Our results showed that several circRNAs, such as hsa_circRNA_404686, may serve as promising diagnostic marker for PTMC (L) in female. |
format | Online Article Text |
id | pubmed-7676571 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-76765712020-11-24 Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis Yang, Wenwen Bai, Chao Zhang, Li Li, Zongbao Tian, Ye Yang, Zhenwei Wang, Liang Wu, Wennian Medicine (Baltimore) 4300 The study aims to characterize the circular RNA (circRNA) expression profile that is functionally related with the invasiveness of papillary thyroid microcarcinoma (PTMC). A total of 13 pairs of female patients with non-invasive PTMC or lymph node metastasis PTMC (PTMC (L)) were included and the serum RNA was obtained. CircRNA microarray was performed to identify the circRNA expression profile. Real time-PCR was used to verify circRNA expression. Bioinformatic approaches were adopted to annotate the function of differentially expressed circRNAs and construct the circRNA-miRNA-mRNA network. In total, 400 significantly upregulated and 290 significantly downregulated circRNAs were identified in PTMC (L) compared with PTMC. Among them, 10 circRNAs were selected and validated by real time-PCR. Putative microRNAs (miRNAs) that could bind to the differentially expressed circRNAs were predicted. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses of target genes of the differentially expressed circRNAs revealed that these circRNAs may play an important role in lymph node metastasis. Finally, circRNA targeted miRNAs were predicted and a circRNA-miRNA-mRNA network was constructed for hsa_circRNA_404686. Our results showed that several circRNAs, such as hsa_circRNA_404686, may serve as promising diagnostic marker for PTMC (L) in female. Lippincott Williams & Wilkins 2020-11-20 /pmc/articles/PMC7676571/ /pubmed/33217846 http://dx.doi.org/10.1097/MD.0000000000023255 Text en Copyright © 2020 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 |
spellingShingle | 4300 Yang, Wenwen Bai, Chao Zhang, Li Li, Zongbao Tian, Ye Yang, Zhenwei Wang, Liang Wu, Wennian Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis |
title | Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis |
title_full | Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis |
title_fullStr | Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis |
title_full_unstemmed | Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis |
title_short | Correlation between serum circRNA and thyroid micropapillary carcinoma with cervical lymph node metastasis |
title_sort | correlation between serum circrna and thyroid micropapillary carcinoma with cervical lymph node metastasis |
topic | 4300 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7676571/ https://www.ncbi.nlm.nih.gov/pubmed/33217846 http://dx.doi.org/10.1097/MD.0000000000023255 |
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