Cargando…
Large-scale analysis of iliopsoas muscle volumes in the UK Biobank
Psoas muscle measurements are frequently used as markers of sarcopenia and predictors of health. Manually measured cross-sectional areas are most commonly used, but there is a lack of consistency regarding the position of the measurement and manual annotations are not practical for large population...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7677387/ https://www.ncbi.nlm.nih.gov/pubmed/33214629 http://dx.doi.org/10.1038/s41598-020-77351-0 |
_version_ | 1783611961800392704 |
---|---|
author | Fitzpatrick, Julie A. Basty, Nicolas Cule, Madeleine Liu, Yi Bell, Jimmy D. Thomas, E. Louise Whitcher, Brandon |
author_facet | Fitzpatrick, Julie A. Basty, Nicolas Cule, Madeleine Liu, Yi Bell, Jimmy D. Thomas, E. Louise Whitcher, Brandon |
author_sort | Fitzpatrick, Julie A. |
collection | PubMed |
description | Psoas muscle measurements are frequently used as markers of sarcopenia and predictors of health. Manually measured cross-sectional areas are most commonly used, but there is a lack of consistency regarding the position of the measurement and manual annotations are not practical for large population studies. We have developed a fully automated method to measure iliopsoas muscle volume (comprised of the psoas and iliacus muscles) using a convolutional neural network. Magnetic resonance images were obtained from the UK Biobank for 5000 participants, balanced for age, gender and BMI. Ninety manual annotations were available for model training and validation. The model showed excellent performance against out-of-sample data (average dice score coefficient of 0.9046 ± 0.0058 for six-fold cross-validation). Iliopsoas muscle volumes were successfully measured in all 5000 participants. Iliopsoas volume was greater in male compared with female subjects. There was a small but significant asymmetry between left and right iliopsoas muscle volumes. We also found that iliopsoas volume was significantly related to height, BMI and age, and that there was an acceleration in muscle volume decrease in men with age. Our method provides a robust technique for measuring iliopsoas muscle volume that can be applied to large cohorts. |
format | Online Article Text |
id | pubmed-7677387 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76773872020-11-23 Large-scale analysis of iliopsoas muscle volumes in the UK Biobank Fitzpatrick, Julie A. Basty, Nicolas Cule, Madeleine Liu, Yi Bell, Jimmy D. Thomas, E. Louise Whitcher, Brandon Sci Rep Article Psoas muscle measurements are frequently used as markers of sarcopenia and predictors of health. Manually measured cross-sectional areas are most commonly used, but there is a lack of consistency regarding the position of the measurement and manual annotations are not practical for large population studies. We have developed a fully automated method to measure iliopsoas muscle volume (comprised of the psoas and iliacus muscles) using a convolutional neural network. Magnetic resonance images were obtained from the UK Biobank for 5000 participants, balanced for age, gender and BMI. Ninety manual annotations were available for model training and validation. The model showed excellent performance against out-of-sample data (average dice score coefficient of 0.9046 ± 0.0058 for six-fold cross-validation). Iliopsoas muscle volumes were successfully measured in all 5000 participants. Iliopsoas volume was greater in male compared with female subjects. There was a small but significant asymmetry between left and right iliopsoas muscle volumes. We also found that iliopsoas volume was significantly related to height, BMI and age, and that there was an acceleration in muscle volume decrease in men with age. Our method provides a robust technique for measuring iliopsoas muscle volume that can be applied to large cohorts. Nature Publishing Group UK 2020-11-19 /pmc/articles/PMC7677387/ /pubmed/33214629 http://dx.doi.org/10.1038/s41598-020-77351-0 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Fitzpatrick, Julie A. Basty, Nicolas Cule, Madeleine Liu, Yi Bell, Jimmy D. Thomas, E. Louise Whitcher, Brandon Large-scale analysis of iliopsoas muscle volumes in the UK Biobank |
title | Large-scale analysis of iliopsoas muscle volumes in the UK Biobank |
title_full | Large-scale analysis of iliopsoas muscle volumes in the UK Biobank |
title_fullStr | Large-scale analysis of iliopsoas muscle volumes in the UK Biobank |
title_full_unstemmed | Large-scale analysis of iliopsoas muscle volumes in the UK Biobank |
title_short | Large-scale analysis of iliopsoas muscle volumes in the UK Biobank |
title_sort | large-scale analysis of iliopsoas muscle volumes in the uk biobank |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7677387/ https://www.ncbi.nlm.nih.gov/pubmed/33214629 http://dx.doi.org/10.1038/s41598-020-77351-0 |
work_keys_str_mv | AT fitzpatrickjuliea largescaleanalysisofiliopsoasmusclevolumesintheukbiobank AT bastynicolas largescaleanalysisofiliopsoasmusclevolumesintheukbiobank AT culemadeleine largescaleanalysisofiliopsoasmusclevolumesintheukbiobank AT liuyi largescaleanalysisofiliopsoasmusclevolumesintheukbiobank AT belljimmyd largescaleanalysisofiliopsoasmusclevolumesintheukbiobank AT thomaselouise largescaleanalysisofiliopsoasmusclevolumesintheukbiobank AT whitcherbrandon largescaleanalysisofiliopsoasmusclevolumesintheukbiobank |