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ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women

The primary concern for HIV-infected pregnant women is the vertical transmission that can occur during pregnancy, in the intrauterine period, during labour or even breastfeeding. The risk of vertical transmission can be reduced by early diagnosis. Therefore, it is necessary to develop new methods to...

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Autores principales: Silva, Lidiane G., Péres, Ana F. S., Freitas, Daniel L. D., Morais, Camilo L. M., Martin, Francis L., Crispim, Janaina C. O., Lima, Kassio M. G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7677535/
https://www.ncbi.nlm.nih.gov/pubmed/33214678
http://dx.doi.org/10.1038/s41598-020-77378-3
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author Silva, Lidiane G.
Péres, Ana F. S.
Freitas, Daniel L. D.
Morais, Camilo L. M.
Martin, Francis L.
Crispim, Janaina C. O.
Lima, Kassio M. G.
author_facet Silva, Lidiane G.
Péres, Ana F. S.
Freitas, Daniel L. D.
Morais, Camilo L. M.
Martin, Francis L.
Crispim, Janaina C. O.
Lima, Kassio M. G.
author_sort Silva, Lidiane G.
collection PubMed
description The primary concern for HIV-infected pregnant women is the vertical transmission that can occur during pregnancy, in the intrauterine period, during labour or even breastfeeding. The risk of vertical transmission can be reduced by early diagnosis. Therefore, it is necessary to develop new methods to detect this virus in a quick and low-cost fashion, as colorimetric assays for HIV detection tend to be laborious and costly. Herein, attenuated total reflection Fourier-transform infrared (ATR-FTIR) spectroscopy combined with multivariate analysis was employed to distinguish HIV-infected patients from healthy uninfected controls in a total of 120 blood plasma samples. The best sensitivity (83%) and specificity (92%) values were obtained using the genetic algorithm with linear discriminant analysis (GA-LDA). These good classification results in addition to the potential for high analytical frequency, the low cost and reagent-free nature of this method demonstrate its potential as an alternative tool for HIV screening during pregnancy.
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spelling pubmed-76775352020-11-23 ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women Silva, Lidiane G. Péres, Ana F. S. Freitas, Daniel L. D. Morais, Camilo L. M. Martin, Francis L. Crispim, Janaina C. O. Lima, Kassio M. G. Sci Rep Article The primary concern for HIV-infected pregnant women is the vertical transmission that can occur during pregnancy, in the intrauterine period, during labour or even breastfeeding. The risk of vertical transmission can be reduced by early diagnosis. Therefore, it is necessary to develop new methods to detect this virus in a quick and low-cost fashion, as colorimetric assays for HIV detection tend to be laborious and costly. Herein, attenuated total reflection Fourier-transform infrared (ATR-FTIR) spectroscopy combined with multivariate analysis was employed to distinguish HIV-infected patients from healthy uninfected controls in a total of 120 blood plasma samples. The best sensitivity (83%) and specificity (92%) values were obtained using the genetic algorithm with linear discriminant analysis (GA-LDA). These good classification results in addition to the potential for high analytical frequency, the low cost and reagent-free nature of this method demonstrate its potential as an alternative tool for HIV screening during pregnancy. Nature Publishing Group UK 2020-11-19 /pmc/articles/PMC7677535/ /pubmed/33214678 http://dx.doi.org/10.1038/s41598-020-77378-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Silva, Lidiane G.
Péres, Ana F. S.
Freitas, Daniel L. D.
Morais, Camilo L. M.
Martin, Francis L.
Crispim, Janaina C. O.
Lima, Kassio M. G.
ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women
title ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women
title_full ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women
title_fullStr ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women
title_full_unstemmed ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women
title_short ATR-FTIR spectroscopy in blood plasma combined with multivariate analysis to detect HIV infection in pregnant women
title_sort atr-ftir spectroscopy in blood plasma combined with multivariate analysis to detect hiv infection in pregnant women
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7677535/
https://www.ncbi.nlm.nih.gov/pubmed/33214678
http://dx.doi.org/10.1038/s41598-020-77378-3
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