Cargando…

(1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7

The SARS-CoV-2 genome encodes for approximately 30 proteins. Within the international project covid19-nmr, we distribute the spectroscopic analysis of the viral proteins and RNA. Here, we report NMR chemical shift assignments for the protein nsp7. The 83 amino acid nsp7 protein is an essential cofac...

Descripción completa

Detalles Bibliográficos
Autores principales: Tonelli, Marco, Rienstra, Chad, Anderson, Thomas K., Kirchdoerfer, Rob, Henzler-Wildman, Katherine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7678775/
https://www.ncbi.nlm.nih.gov/pubmed/33219414
http://dx.doi.org/10.1007/s12104-020-09985-0
_version_ 1783612224954171392
author Tonelli, Marco
Rienstra, Chad
Anderson, Thomas K.
Kirchdoerfer, Rob
Henzler-Wildman, Katherine
author_facet Tonelli, Marco
Rienstra, Chad
Anderson, Thomas K.
Kirchdoerfer, Rob
Henzler-Wildman, Katherine
author_sort Tonelli, Marco
collection PubMed
description The SARS-CoV-2 genome encodes for approximately 30 proteins. Within the international project covid19-nmr, we distribute the spectroscopic analysis of the viral proteins and RNA. Here, we report NMR chemical shift assignments for the protein nsp7. The 83 amino acid nsp7 protein is an essential cofactor in the RNA-dependent RNA polymerase. The polymerase activity and processivity of nsp12 are greatly enhanced by binding 1 copy of nsp7 and 2 copies of nsp8 to form a 160 kD complex. A separate hexadecameric complex of nsp7 and nsp8 (8 copies of each) forms a large ring-like structure. Thus, nsp7 is an important component of several large protein complexes that are required for replication of the large and complex coronavirus genome. We here report the near-complete NMR backbone and sidechain resonance assignment ((1)H,(13)C,(15)N) of isolated nsp7 from SARS-CoV-2 in solution. Further, we derive the secondary structure and compare it to the previously reported assignments and structure of the SARS-CoV nsp7.
format Online
Article
Text
id pubmed-7678775
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Springer Netherlands
record_format MEDLINE/PubMed
spelling pubmed-76787752020-11-23 (1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7 Tonelli, Marco Rienstra, Chad Anderson, Thomas K. Kirchdoerfer, Rob Henzler-Wildman, Katherine Biomol NMR Assign Article The SARS-CoV-2 genome encodes for approximately 30 proteins. Within the international project covid19-nmr, we distribute the spectroscopic analysis of the viral proteins and RNA. Here, we report NMR chemical shift assignments for the protein nsp7. The 83 amino acid nsp7 protein is an essential cofactor in the RNA-dependent RNA polymerase. The polymerase activity and processivity of nsp12 are greatly enhanced by binding 1 copy of nsp7 and 2 copies of nsp8 to form a 160 kD complex. A separate hexadecameric complex of nsp7 and nsp8 (8 copies of each) forms a large ring-like structure. Thus, nsp7 is an important component of several large protein complexes that are required for replication of the large and complex coronavirus genome. We here report the near-complete NMR backbone and sidechain resonance assignment ((1)H,(13)C,(15)N) of isolated nsp7 from SARS-CoV-2 in solution. Further, we derive the secondary structure and compare it to the previously reported assignments and structure of the SARS-CoV nsp7. Springer Netherlands 2020-11-20 2021 /pmc/articles/PMC7678775/ /pubmed/33219414 http://dx.doi.org/10.1007/s12104-020-09985-0 Text en © Springer Nature B.V. 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Tonelli, Marco
Rienstra, Chad
Anderson, Thomas K.
Kirchdoerfer, Rob
Henzler-Wildman, Katherine
(1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7
title (1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7
title_full (1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7
title_fullStr (1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7
title_full_unstemmed (1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7
title_short (1)H, (13)C, and (15)N backbone and side chain chemical shift assignments of the SARS-CoV-2 non-structural protein 7
title_sort (1)h, (13)c, and (15)n backbone and side chain chemical shift assignments of the sars-cov-2 non-structural protein 7
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7678775/
https://www.ncbi.nlm.nih.gov/pubmed/33219414
http://dx.doi.org/10.1007/s12104-020-09985-0
work_keys_str_mv AT tonellimarco 1h13cand15nbackboneandsidechainchemicalshiftassignmentsofthesarscov2nonstructuralprotein7
AT rienstrachad 1h13cand15nbackboneandsidechainchemicalshiftassignmentsofthesarscov2nonstructuralprotein7
AT andersonthomask 1h13cand15nbackboneandsidechainchemicalshiftassignmentsofthesarscov2nonstructuralprotein7
AT kirchdoerferrob 1h13cand15nbackboneandsidechainchemicalshiftassignmentsofthesarscov2nonstructuralprotein7
AT henzlerwildmankatherine 1h13cand15nbackboneandsidechainchemicalshiftassignmentsofthesarscov2nonstructuralprotein7