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Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography

We report a new computed tomography reconstruction method, named quantisation units reconstruction technique (QURT), applicable to electron and other fields of tomography. Conventional electron tomography methods such as filtered back projection, weighted back projection, simultaneous iterative reco...

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Detalles Bibliográficos
Autores principales: Baba, Norio, Kaneko, Kenji, Baba, Misuzu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7678869/
https://www.ncbi.nlm.nih.gov/pubmed/33214577
http://dx.doi.org/10.1038/s41598-020-77156-1
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author Baba, Norio
Kaneko, Kenji
Baba, Misuzu
author_facet Baba, Norio
Kaneko, Kenji
Baba, Misuzu
author_sort Baba, Norio
collection PubMed
description We report a new computed tomography reconstruction method, named quantisation units reconstruction technique (QURT), applicable to electron and other fields of tomography. Conventional electron tomography methods such as filtered back projection, weighted back projection, simultaneous iterative reconstructed technique, etc. suffer from the ‘missing wedge’ problem due to the limited tilt-angle range. QURT demonstrates improvements to solve this problem by recovering a structural image blurred due to the missing wedge and substantially reconstructs the structure even if the number of projection images is small. QURT reconstructs a cross-section image by arranging grey-level quantisation units (QU pieces) in three-dimensional image space via unique discrete processing. Its viability is confirmed by model simulations and experimental results. An important difference from recently developed methods such as discrete algebraic reconstruction technique (DART), total variation regularisation—DART, and compressed sensing is that prior knowledge of the conditions regarding the specimen or the expected cross-section image is not necessary.
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spelling pubmed-76788692020-11-23 Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography Baba, Norio Kaneko, Kenji Baba, Misuzu Sci Rep Article We report a new computed tomography reconstruction method, named quantisation units reconstruction technique (QURT), applicable to electron and other fields of tomography. Conventional electron tomography methods such as filtered back projection, weighted back projection, simultaneous iterative reconstructed technique, etc. suffer from the ‘missing wedge’ problem due to the limited tilt-angle range. QURT demonstrates improvements to solve this problem by recovering a structural image blurred due to the missing wedge and substantially reconstructs the structure even if the number of projection images is small. QURT reconstructs a cross-section image by arranging grey-level quantisation units (QU pieces) in three-dimensional image space via unique discrete processing. Its viability is confirmed by model simulations and experimental results. An important difference from recently developed methods such as discrete algebraic reconstruction technique (DART), total variation regularisation—DART, and compressed sensing is that prior knowledge of the conditions regarding the specimen or the expected cross-section image is not necessary. Nature Publishing Group UK 2020-11-19 /pmc/articles/PMC7678869/ /pubmed/33214577 http://dx.doi.org/10.1038/s41598-020-77156-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Baba, Norio
Kaneko, Kenji
Baba, Misuzu
Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
title Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
title_full Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
title_fullStr Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
title_full_unstemmed Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
title_short Novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
title_sort novel nonlinear reconstruction method with grey-level quantisation units for electron tomography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7678869/
https://www.ncbi.nlm.nih.gov/pubmed/33214577
http://dx.doi.org/10.1038/s41598-020-77156-1
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