Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam

We performed whole-genome sequencing of Vibrio cholerae O1 isolates from Laos, Thailand, and Vietnam, where cholera outbreaks occurred, to determine their genetic lineages. Core genome phylogenetic analysis revealed that the isolates located in same lineage without regional clusters, which suggests...

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Autores principales: Morita, Masatomo, Okada, Kazuhisa, Yamashiro, Tetsu, Sekizuka, Tsuyoshi, Roobthaisong, Amonrattana, Wongboot, Warawan, Chantaroj, Siriporn, Tu, Nguyen Dong, Xangsayarath, Phonepadith, Sithivong, Noikaseumsy, Noilath, Khambai, Vongdouangchanh, Arounnapha, Kuroda, Makoto, Hamada, Shigeyuki, Izumiya, Hidemasa, Ohnishi, Makoto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Brief Reports
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7679066/
https://www.ncbi.nlm.nih.gov/pubmed/33244479
http://dx.doi.org/10.1093/ofid/ofaa492
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author Morita, Masatomo
Okada, Kazuhisa
Yamashiro, Tetsu
Sekizuka, Tsuyoshi
Roobthaisong, Amonrattana
Wongboot, Warawan
Chantaroj, Siriporn
Tu, Nguyen Dong
Xangsayarath, Phonepadith
Sithivong, Noikaseumsy
Noilath, Khambai
Vongdouangchanh, Arounnapha
Kuroda, Makoto
Hamada, Shigeyuki
Izumiya, Hidemasa
Ohnishi, Makoto
author_facet Morita, Masatomo
Okada, Kazuhisa
Yamashiro, Tetsu
Sekizuka, Tsuyoshi
Roobthaisong, Amonrattana
Wongboot, Warawan
Chantaroj, Siriporn
Tu, Nguyen Dong
Xangsayarath, Phonepadith
Sithivong, Noikaseumsy
Noilath, Khambai
Vongdouangchanh, Arounnapha
Kuroda, Makoto
Hamada, Shigeyuki
Izumiya, Hidemasa
Ohnishi, Makoto
author_sort Morita, Masatomo
collection PubMed
description We performed whole-genome sequencing of Vibrio cholerae O1 isolates from Laos, Thailand, and Vietnam, where cholera outbreaks occurred, to determine their genetic lineages. Core genome phylogenetic analysis revealed that the isolates located in same lineage without regional clusters, which suggests that closely related strains circulated in Southeast Asia.
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spelling pubmed-76790662020-11-25 Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam Morita, Masatomo Okada, Kazuhisa Yamashiro, Tetsu Sekizuka, Tsuyoshi Roobthaisong, Amonrattana Wongboot, Warawan Chantaroj, Siriporn Tu, Nguyen Dong Xangsayarath, Phonepadith Sithivong, Noikaseumsy Noilath, Khambai Vongdouangchanh, Arounnapha Kuroda, Makoto Hamada, Shigeyuki Izumiya, Hidemasa Ohnishi, Makoto Open Forum Infect Dis Brief Reports We performed whole-genome sequencing of Vibrio cholerae O1 isolates from Laos, Thailand, and Vietnam, where cholera outbreaks occurred, to determine their genetic lineages. Core genome phylogenetic analysis revealed that the isolates located in same lineage without regional clusters, which suggests that closely related strains circulated in Southeast Asia. Oxford University Press 2020-10-16 /pmc/articles/PMC7679066/ /pubmed/33244479 http://dx.doi.org/10.1093/ofid/ofaa492 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Brief Reports
Morita, Masatomo
Okada, Kazuhisa
Yamashiro, Tetsu
Sekizuka, Tsuyoshi
Roobthaisong, Amonrattana
Wongboot, Warawan
Chantaroj, Siriporn
Tu, Nguyen Dong
Xangsayarath, Phonepadith
Sithivong, Noikaseumsy
Noilath, Khambai
Vongdouangchanh, Arounnapha
Kuroda, Makoto
Hamada, Shigeyuki
Izumiya, Hidemasa
Ohnishi, Makoto
Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam
title Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam
title_full Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam
title_fullStr Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam
title_full_unstemmed Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam
title_short Phylogenetic Analysis Revealed the Dissemination of Closely Related Epidemic Vibrio cholerae O1 Isolates in Laos, Thailand, and Vietnam
title_sort phylogenetic analysis revealed the dissemination of closely related epidemic vibrio cholerae o1 isolates in laos, thailand, and vietnam
topic Brief Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7679066/
https://www.ncbi.nlm.nih.gov/pubmed/33244479
http://dx.doi.org/10.1093/ofid/ofaa492
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