Cargando…

The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading

Automated detection of exudates from fundus images plays an important role in diabetic retinopathy (DR) screening and evaluation, for which supervised or semi-supervised learning methods are typically preferred. However, a potential limitation of supervised and semi-supervised learning based detecti...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Li, Li, Meng, Huang, Yijin, Cheng, Pujin, Xia, Honghui, Wang, Kai, Yuan, Jin, Tang, Xiaoying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7679367/
https://www.ncbi.nlm.nih.gov/pubmed/33219237
http://dx.doi.org/10.1038/s41597-020-00755-0
_version_ 1783612326595788800
author Lin, Li
Li, Meng
Huang, Yijin
Cheng, Pujin
Xia, Honghui
Wang, Kai
Yuan, Jin
Tang, Xiaoying
author_facet Lin, Li
Li, Meng
Huang, Yijin
Cheng, Pujin
Xia, Honghui
Wang, Kai
Yuan, Jin
Tang, Xiaoying
author_sort Lin, Li
collection PubMed
description Automated detection of exudates from fundus images plays an important role in diabetic retinopathy (DR) screening and evaluation, for which supervised or semi-supervised learning methods are typically preferred. However, a potential limitation of supervised and semi-supervised learning based detection algorithms is that they depend substantially on the sample size of training data and the quality of annotations, which is the fundamental motivation of this work. In this study, we construct a dataset containing 1219 fundus images (from DR patients and healthy controls) with annotations of exudate lesions. In addition to exudate annotations, we also provide four additional labels for each image: left-versus-right eye label, DR grade (severity scale) from three different grading protocols, the bounding box of the optic disc (OD), and fovea location. This dataset provides a great opportunity to analyze the accuracy and reliability of different exudate detection, OD detection, fovea localization, and DR classification algorithms. Moreover, it will facilitate the development of such algorithms in the realm of supervised and semi-supervised learning.
format Online
Article
Text
id pubmed-7679367
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-76793672020-11-24 The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading Lin, Li Li, Meng Huang, Yijin Cheng, Pujin Xia, Honghui Wang, Kai Yuan, Jin Tang, Xiaoying Sci Data Data Descriptor Automated detection of exudates from fundus images plays an important role in diabetic retinopathy (DR) screening and evaluation, for which supervised or semi-supervised learning methods are typically preferred. However, a potential limitation of supervised and semi-supervised learning based detection algorithms is that they depend substantially on the sample size of training data and the quality of annotations, which is the fundamental motivation of this work. In this study, we construct a dataset containing 1219 fundus images (from DR patients and healthy controls) with annotations of exudate lesions. In addition to exudate annotations, we also provide four additional labels for each image: left-versus-right eye label, DR grade (severity scale) from three different grading protocols, the bounding box of the optic disc (OD), and fovea location. This dataset provides a great opportunity to analyze the accuracy and reliability of different exudate detection, OD detection, fovea localization, and DR classification algorithms. Moreover, it will facilitate the development of such algorithms in the realm of supervised and semi-supervised learning. Nature Publishing Group UK 2020-11-20 /pmc/articles/PMC7679367/ /pubmed/33219237 http://dx.doi.org/10.1038/s41597-020-00755-0 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Lin, Li
Li, Meng
Huang, Yijin
Cheng, Pujin
Xia, Honghui
Wang, Kai
Yuan, Jin
Tang, Xiaoying
The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading
title The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading
title_full The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading
title_fullStr The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading
title_full_unstemmed The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading
title_short The SUSTech-SYSU dataset for automated exudate detection and diabetic retinopathy grading
title_sort sustech-sysu dataset for automated exudate detection and diabetic retinopathy grading
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7679367/
https://www.ncbi.nlm.nih.gov/pubmed/33219237
http://dx.doi.org/10.1038/s41597-020-00755-0
work_keys_str_mv AT linli thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT limeng thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT huangyijin thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT chengpujin thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT xiahonghui thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT wangkai thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT yuanjin thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT tangxiaoying thesustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT linli sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT limeng sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT huangyijin sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT chengpujin sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT xiahonghui sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT wangkai sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT yuanjin sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading
AT tangxiaoying sustechsysudatasetforautomatedexudatedetectionanddiabeticretinopathygrading