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Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)

Genes act in groups known as gene modules, which accomplish different cellular functions in the body. The modular nature of gene networks was used in this study to detect functionally enriched modules in samples obtained from COPD patients. We analyzed modules extracted from COPD samples and identif...

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Detalles Bibliográficos
Autores principales: Sharma, Pooja, Pandey, Anuj K., Bhattacharyya, Dhruba K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7680043/
https://www.ncbi.nlm.nih.gov/pubmed/33260035
http://dx.doi.org/10.1016/j.compbiomed.2020.104126
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author Sharma, Pooja
Pandey, Anuj K.
Bhattacharyya, Dhruba K.
author_facet Sharma, Pooja
Pandey, Anuj K.
Bhattacharyya, Dhruba K.
author_sort Sharma, Pooja
collection PubMed
description Genes act in groups known as gene modules, which accomplish different cellular functions in the body. The modular nature of gene networks was used in this study to detect functionally enriched modules in samples obtained from COPD patients. We analyzed modules extracted from COPD samples and identified crucial genes associated with the disease COVID-19. We also extracted modules from a COVID-19 dataset and analyzed a suspected set of genes that may be associated with this deadly disease. We used information available for two other viruses that cause SARS and MERS because their physiology is similar to that of the COVID-19 virus. We report several crucial genes associated with COVID-19: RPA2, POLD4, MAPK8, IRF7, JUN, NFKB1, NFKBIA, CD40LG, FASLG, ICAM1, LIFR, STAT2 and CCR1. Most of these genes are related to the immune system and respiratory organs, which emphasizes the fact that COPD weakens this system and makes patients more susceptible to developing severe COVID-19.
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spelling pubmed-76800432020-11-23 Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶) Sharma, Pooja Pandey, Anuj K. Bhattacharyya, Dhruba K. Comput Biol Med Article Genes act in groups known as gene modules, which accomplish different cellular functions in the body. The modular nature of gene networks was used in this study to detect functionally enriched modules in samples obtained from COPD patients. We analyzed modules extracted from COPD samples and identified crucial genes associated with the disease COVID-19. We also extracted modules from a COVID-19 dataset and analyzed a suspected set of genes that may be associated with this deadly disease. We used information available for two other viruses that cause SARS and MERS because their physiology is similar to that of the COVID-19 virus. We report several crucial genes associated with COVID-19: RPA2, POLD4, MAPK8, IRF7, JUN, NFKB1, NFKBIA, CD40LG, FASLG, ICAM1, LIFR, STAT2 and CCR1. Most of these genes are related to the immune system and respiratory organs, which emphasizes the fact that COPD weakens this system and makes patients more susceptible to developing severe COVID-19. Elsevier Ltd. 2021-01 2020-11-21 /pmc/articles/PMC7680043/ /pubmed/33260035 http://dx.doi.org/10.1016/j.compbiomed.2020.104126 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Sharma, Pooja
Pandey, Anuj K.
Bhattacharyya, Dhruba K.
Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)
title Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)
title_full Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)
title_fullStr Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)
title_full_unstemmed Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)
title_short Determining crucial genes associated with COVID-19 based on COPD Findings(✶,✶✶)
title_sort determining crucial genes associated with covid-19 based on copd findings(✶,✶✶)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7680043/
https://www.ncbi.nlm.nih.gov/pubmed/33260035
http://dx.doi.org/10.1016/j.compbiomed.2020.104126
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