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Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation
As an esthetic trait, ray floret color has a high importance in the development of new sunflower genotypes and their market value. Standard methodology for the evaluation of sunflower ray florets is based on International Union for the Protection of New Varieties of Plants (UPOV) guidelines for sunf...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7680878/ https://www.ncbi.nlm.nih.gov/pubmed/33240302 http://dx.doi.org/10.3389/fpls.2020.584822 |
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author | Zorić, Martina Cvejić, Sandra Mladenović, Emina Jocić, Siniša Babić, Zdenka Marjanović Jeromela, Ana Miladinović, Dragana |
author_facet | Zorić, Martina Cvejić, Sandra Mladenović, Emina Jocić, Siniša Babić, Zdenka Marjanović Jeromela, Ana Miladinović, Dragana |
author_sort | Zorić, Martina |
collection | PubMed |
description | As an esthetic trait, ray floret color has a high importance in the development of new sunflower genotypes and their market value. Standard methodology for the evaluation of sunflower ray florets is based on International Union for the Protection of New Varieties of Plants (UPOV) guidelines for sunflower. The major deficiency of this methodology is the necessity of high expertise from evaluators and its high subjectivity. To test the hypothesis that humans cannot distinguish colors equally, six commercial sunflower genotypes were evaluated by 100 agriculture experts, using UPOV guidelines. Moreover, the paper proposes a new methodology for sunflower ray floret color classification – digital UPOV (dUPOV), that relies on software image analysis but still leaves the final decision to the evaluator. For this purpose, we created a new Flower Color Image Analysis (FloCIA) software for sunflower ray floret digital image segmentation and automatic classification into one of the categories given by the UPOV guidelines. To assess the benefits and relevance of this method, accuracy of the newly developed software was studied by comparing 153 digital photographs of F(2) genotypes with expert evaluator answers which were used as the ground truth. The FloCIA enabled visualizations of segmentation of ray floret images of sunflower genotypes used in the study, as well as two dominant color clusters, percentages of pixels belonging to each UPOV color category with graphical representation in the CIE (International Commission on Illumination) L(∗)a(∗)b(∗) (or simply Lab) color space in relation to the mean vectors of the UPOV category. Precision (repeatability) of ray flower color determination was greater between dUPOV based expert color evaluation and software evaluation than between two UPOV based evaluations performed by the same expert. The accuracy of FloCIA software used for unsupervised (automatic) classification was 91.50% on the image dataset containing 153 photographs of F(2) genotypes. In this case, the software and the experts had classified 140 out of 153 of images in the same color categories. This visual presentation can serve as a guideline for evaluators to determine the dominant color and to conclude if more than one significant color exists in the examined genotype. |
format | Online Article Text |
id | pubmed-7680878 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-76808782020-11-24 Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation Zorić, Martina Cvejić, Sandra Mladenović, Emina Jocić, Siniša Babić, Zdenka Marjanović Jeromela, Ana Miladinović, Dragana Front Plant Sci Plant Science As an esthetic trait, ray floret color has a high importance in the development of new sunflower genotypes and their market value. Standard methodology for the evaluation of sunflower ray florets is based on International Union for the Protection of New Varieties of Plants (UPOV) guidelines for sunflower. The major deficiency of this methodology is the necessity of high expertise from evaluators and its high subjectivity. To test the hypothesis that humans cannot distinguish colors equally, six commercial sunflower genotypes were evaluated by 100 agriculture experts, using UPOV guidelines. Moreover, the paper proposes a new methodology for sunflower ray floret color classification – digital UPOV (dUPOV), that relies on software image analysis but still leaves the final decision to the evaluator. For this purpose, we created a new Flower Color Image Analysis (FloCIA) software for sunflower ray floret digital image segmentation and automatic classification into one of the categories given by the UPOV guidelines. To assess the benefits and relevance of this method, accuracy of the newly developed software was studied by comparing 153 digital photographs of F(2) genotypes with expert evaluator answers which were used as the ground truth. The FloCIA enabled visualizations of segmentation of ray floret images of sunflower genotypes used in the study, as well as two dominant color clusters, percentages of pixels belonging to each UPOV color category with graphical representation in the CIE (International Commission on Illumination) L(∗)a(∗)b(∗) (or simply Lab) color space in relation to the mean vectors of the UPOV category. Precision (repeatability) of ray flower color determination was greater between dUPOV based expert color evaluation and software evaluation than between two UPOV based evaluations performed by the same expert. The accuracy of FloCIA software used for unsupervised (automatic) classification was 91.50% on the image dataset containing 153 photographs of F(2) genotypes. In this case, the software and the experts had classified 140 out of 153 of images in the same color categories. This visual presentation can serve as a guideline for evaluators to determine the dominant color and to conclude if more than one significant color exists in the examined genotype. Frontiers Media S.A. 2020-11-09 /pmc/articles/PMC7680878/ /pubmed/33240302 http://dx.doi.org/10.3389/fpls.2020.584822 Text en Copyright © 2020 Zorić, Cvejić, Mladenović, Jocić, Babić, Marjanović Jeromela and Miladinović. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Zorić, Martina Cvejić, Sandra Mladenović, Emina Jocić, Siniša Babić, Zdenka Marjanović Jeromela, Ana Miladinović, Dragana Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation |
title | Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation |
title_full | Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation |
title_fullStr | Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation |
title_full_unstemmed | Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation |
title_short | Digital Image Analysis Using FloCIA Software for Ornamental Sunflower Ray Floret Color Evaluation |
title_sort | digital image analysis using flocia software for ornamental sunflower ray floret color evaluation |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7680878/ https://www.ncbi.nlm.nih.gov/pubmed/33240302 http://dx.doi.org/10.3389/fpls.2020.584822 |
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