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Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape

[Image: see text] Hydrophobicity is a phenomenon of great importance in biology, chemistry, and biochemistry. It is defined as the interaction between nonpolar molecules or groups in water and their low solubility. Hydrophobic interactions affect many processes in water, for example, complexation, s...

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Autores principales: Bogunia, Małgorzata, Makowski, Mariusz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2020
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7681779/
https://www.ncbi.nlm.nih.gov/pubmed/33147018
http://dx.doi.org/10.1021/acs.jpcb.0c06399
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author Bogunia, Małgorzata
Makowski, Mariusz
author_facet Bogunia, Małgorzata
Makowski, Mariusz
author_sort Bogunia, Małgorzata
collection PubMed
description [Image: see text] Hydrophobicity is a phenomenon of great importance in biology, chemistry, and biochemistry. It is defined as the interaction between nonpolar molecules or groups in water and their low solubility. Hydrophobic interactions affect many processes in water, for example, complexation, surfactant aggregation, and coagulation. These interactions play a pivotal role in the formation and stability of proteins or biological membranes. In the present study, we assessed the effect of ionic strength, solute size, and shape on hydrophobic interactions between pairs of nonpolar particles. Pairs of methane, neopentane, adamantane, fullerene, ethane, propane, butane, hexane, octane, and decane were simulated by molecular dynamics in AMBER 16.0 force field. As a solvent, TIP3P and TIP4PEW water models were used. Potential of mean force (PMF) plots of these dimers were determined at four values of ionic strength, 0, 0.04, 0.08, and 0.40 mol/dm(3), to observe its impact on hydrophobic interactions. The characteristic shape of PMFs with three extrema (contact minimum, solvent-separated minimum, and desolvation maximum) was observed for most of the compounds for hydrophobic interactions. Ionic strength affected hydrophobic interactions. We observed a tendency to deepen contact minima with an increase in ionic strength value in the case of spherical and spheroidal molecules. Additionally, two-dimensional distribution functions describing water density and average number of hydrogen bonds between water molecules were calculated in both water models for adamantane and hexane. It was observed that the density of water did not significantly change with the increase in ionic strength, but the average number of hydrogen bonds changed. The latter tendency strongly depends on the water model used for simulations.
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spelling pubmed-76817792020-11-24 Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape Bogunia, Małgorzata Makowski, Mariusz J Phys Chem B [Image: see text] Hydrophobicity is a phenomenon of great importance in biology, chemistry, and biochemistry. It is defined as the interaction between nonpolar molecules or groups in water and their low solubility. Hydrophobic interactions affect many processes in water, for example, complexation, surfactant aggregation, and coagulation. These interactions play a pivotal role in the formation and stability of proteins or biological membranes. In the present study, we assessed the effect of ionic strength, solute size, and shape on hydrophobic interactions between pairs of nonpolar particles. Pairs of methane, neopentane, adamantane, fullerene, ethane, propane, butane, hexane, octane, and decane were simulated by molecular dynamics in AMBER 16.0 force field. As a solvent, TIP3P and TIP4PEW water models were used. Potential of mean force (PMF) plots of these dimers were determined at four values of ionic strength, 0, 0.04, 0.08, and 0.40 mol/dm(3), to observe its impact on hydrophobic interactions. The characteristic shape of PMFs with three extrema (contact minimum, solvent-separated minimum, and desolvation maximum) was observed for most of the compounds for hydrophobic interactions. Ionic strength affected hydrophobic interactions. We observed a tendency to deepen contact minima with an increase in ionic strength value in the case of spherical and spheroidal molecules. Additionally, two-dimensional distribution functions describing water density and average number of hydrogen bonds between water molecules were calculated in both water models for adamantane and hexane. It was observed that the density of water did not significantly change with the increase in ionic strength, but the average number of hydrogen bonds changed. The latter tendency strongly depends on the water model used for simulations. American Chemical Society 2020-11-04 2020-11-19 /pmc/articles/PMC7681779/ /pubmed/33147018 http://dx.doi.org/10.1021/acs.jpcb.0c06399 Text en © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Bogunia, Małgorzata
Makowski, Mariusz
Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape
title Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape
title_full Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape
title_fullStr Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape
title_full_unstemmed Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape
title_short Influence of Ionic Strength on Hydrophobic Interactions in Water: Dependence on Solute Size and Shape
title_sort influence of ionic strength on hydrophobic interactions in water: dependence on solute size and shape
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7681779/
https://www.ncbi.nlm.nih.gov/pubmed/33147018
http://dx.doi.org/10.1021/acs.jpcb.0c06399
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