The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)

The complete chloroplast (cp) genome of Mitreola yangchunensis was sequenced and assembled for the first time. The genome is 154,665 bp in length, containing a large single-copy (LSC) region of 85,351 bp, a small single-copy region (SSC) of 18,218 bp and a pair of inverted repeats (IRs) of 25,548 bp...

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Detalles Bibliográficos
Autores principales: Du, Xiaolang, Cao, Lan, Sheng, Shasha, Zhong, Guoyue, Mu, Zejing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Rapid Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7682734/
https://www.ncbi.nlm.nih.gov/pubmed/33367110
http://dx.doi.org/10.1080/23802359.2020.1835575
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author Du, Xiaolang
Cao, Lan
Sheng, Shasha
Zhong, Guoyue
Mu, Zejing
author_facet Du, Xiaolang
Cao, Lan
Sheng, Shasha
Zhong, Guoyue
Mu, Zejing
author_sort Du, Xiaolang
collection PubMed
description The complete chloroplast (cp) genome of Mitreola yangchunensis was sequenced and assembled for the first time. The genome is 154,665 bp in length, containing a large single-copy (LSC) region of 85,351 bp, a small single-copy region (SSC) of 18,218 bp and a pair of inverted repeats (IRs) of 25,548 bp. It contains 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content is 37.9%, while the corresponding values of LSC, SSC, and IR regions are 35.9, 32.0, and 43.4%, respectively. Phylogenetic analyses using complete cp genomes showed that M. yangchunensis is most closely related to Mitrasacme pygmaea in Loganiaceae, and Gelsemiaceae and Loganiaceae form a single cluster with high support value.
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spelling pubmed-76827342020-12-22 The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae) Du, Xiaolang Cao, Lan Sheng, Shasha Zhong, Guoyue Mu, Zejing Mitochondrial DNA B Resour Rapid Communication The complete chloroplast (cp) genome of Mitreola yangchunensis was sequenced and assembled for the first time. The genome is 154,665 bp in length, containing a large single-copy (LSC) region of 85,351 bp, a small single-copy region (SSC) of 18,218 bp and a pair of inverted repeats (IRs) of 25,548 bp. It contains 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content is 37.9%, while the corresponding values of LSC, SSC, and IR regions are 35.9, 32.0, and 43.4%, respectively. Phylogenetic analyses using complete cp genomes showed that M. yangchunensis is most closely related to Mitrasacme pygmaea in Loganiaceae, and Gelsemiaceae and Loganiaceae form a single cluster with high support value. Taylor & Francis 2020-11-20 /pmc/articles/PMC7682734/ /pubmed/33367110 http://dx.doi.org/10.1080/23802359.2020.1835575 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communication
Du, Xiaolang
Cao, Lan
Sheng, Shasha
Zhong, Guoyue
Mu, Zejing
The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)
title The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)
title_full The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)
title_fullStr The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)
title_full_unstemmed The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)
title_short The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)
title_sort complete chloroplast genome of mitreola yangchunensis (loganiaceae)
topic Rapid Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7682734/
https://www.ncbi.nlm.nih.gov/pubmed/33367110
http://dx.doi.org/10.1080/23802359.2020.1835575
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