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Identification of toxic mold species through Raman spectroscopy of fungal conidia

We use a 785 nm shifted excitation Raman difference (SERDS) technique to measure the Raman spectra of the conidia of 10 mold species of especial toxicological, medical, and industrial importance, including Stachybotrys chartarum, Penicillium chrysogenum, Aspergillus fumigatus, Aspergillus flavus, As...

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Autores principales: Strycker, Benjamin D., Han, Zehua, Duan, Zheng, Commer, Blake, Wang, Kai, Shaw, Brian D., Sokolov, Alexei V., Scully, Marlan O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7682877/
https://www.ncbi.nlm.nih.gov/pubmed/33227000
http://dx.doi.org/10.1371/journal.pone.0242361
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author Strycker, Benjamin D.
Han, Zehua
Duan, Zheng
Commer, Blake
Wang, Kai
Shaw, Brian D.
Sokolov, Alexei V.
Scully, Marlan O.
author_facet Strycker, Benjamin D.
Han, Zehua
Duan, Zheng
Commer, Blake
Wang, Kai
Shaw, Brian D.
Sokolov, Alexei V.
Scully, Marlan O.
author_sort Strycker, Benjamin D.
collection PubMed
description We use a 785 nm shifted excitation Raman difference (SERDS) technique to measure the Raman spectra of the conidia of 10 mold species of especial toxicological, medical, and industrial importance, including Stachybotrys chartarum, Penicillium chrysogenum, Aspergillus fumigatus, Aspergillus flavus, Aspergillus oryzae, Aspergillus niger, and others. We find that both the pure Raman and fluorescence signals support the hypothesis that for an excitation wavelength of 785 nm the Raman signal originates from the melanin pigments bound within the cell wall of the conidium. In addition, the major features of the pure Raman spectra group into profiles that we hypothesize may be due to differences in the complex melanin biosynthesis pathways. We then combine the Raman spectral data with neural network models to predict species classification with an accuracy above 99%. Finally, the Raman spectral data of all species investigated is made freely available for download and use.
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spelling pubmed-76828772020-12-02 Identification of toxic mold species through Raman spectroscopy of fungal conidia Strycker, Benjamin D. Han, Zehua Duan, Zheng Commer, Blake Wang, Kai Shaw, Brian D. Sokolov, Alexei V. Scully, Marlan O. PLoS One Research Article We use a 785 nm shifted excitation Raman difference (SERDS) technique to measure the Raman spectra of the conidia of 10 mold species of especial toxicological, medical, and industrial importance, including Stachybotrys chartarum, Penicillium chrysogenum, Aspergillus fumigatus, Aspergillus flavus, Aspergillus oryzae, Aspergillus niger, and others. We find that both the pure Raman and fluorescence signals support the hypothesis that for an excitation wavelength of 785 nm the Raman signal originates from the melanin pigments bound within the cell wall of the conidium. In addition, the major features of the pure Raman spectra group into profiles that we hypothesize may be due to differences in the complex melanin biosynthesis pathways. We then combine the Raman spectral data with neural network models to predict species classification with an accuracy above 99%. Finally, the Raman spectral data of all species investigated is made freely available for download and use. Public Library of Science 2020-11-23 /pmc/articles/PMC7682877/ /pubmed/33227000 http://dx.doi.org/10.1371/journal.pone.0242361 Text en © 2020 Strycker et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Strycker, Benjamin D.
Han, Zehua
Duan, Zheng
Commer, Blake
Wang, Kai
Shaw, Brian D.
Sokolov, Alexei V.
Scully, Marlan O.
Identification of toxic mold species through Raman spectroscopy of fungal conidia
title Identification of toxic mold species through Raman spectroscopy of fungal conidia
title_full Identification of toxic mold species through Raman spectroscopy of fungal conidia
title_fullStr Identification of toxic mold species through Raman spectroscopy of fungal conidia
title_full_unstemmed Identification of toxic mold species through Raman spectroscopy of fungal conidia
title_short Identification of toxic mold species through Raman spectroscopy of fungal conidia
title_sort identification of toxic mold species through raman spectroscopy of fungal conidia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7682877/
https://www.ncbi.nlm.nih.gov/pubmed/33227000
http://dx.doi.org/10.1371/journal.pone.0242361
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