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Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment

We propose a random forest classifier for identifying adequacy of liver MR images using handcrafted (HC) features and deep convolutional neural networks (CNNs), and analyze the relative role of these two components in relation to the training sample size. The HC features, specifically developed for...

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Detalles Bibliográficos
Autores principales: Lin, Wenyi, Hasenstab, Kyle, Moura Cunha, Guilherme, Schwartzman, Armin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7683555/
https://www.ncbi.nlm.nih.gov/pubmed/33230152
http://dx.doi.org/10.1038/s41598-020-77264-y
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author Lin, Wenyi
Hasenstab, Kyle
Moura Cunha, Guilherme
Schwartzman, Armin
author_facet Lin, Wenyi
Hasenstab, Kyle
Moura Cunha, Guilherme
Schwartzman, Armin
author_sort Lin, Wenyi
collection PubMed
description We propose a random forest classifier for identifying adequacy of liver MR images using handcrafted (HC) features and deep convolutional neural networks (CNNs), and analyze the relative role of these two components in relation to the training sample size. The HC features, specifically developed for this application, include Gaussian mixture models, Euler characteristic curves and texture analysis. Using HC features outperforms the CNN for smaller sample sizes and with increased interpretability. On the other hand, with enough training data, the combined classifier outperforms the models trained with HC features or CNN features alone. These results illustrate the added value of HC features with respect to CNNs, especially when insufficient data is available, as is often found in clinical studies.
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spelling pubmed-76835552020-11-24 Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment Lin, Wenyi Hasenstab, Kyle Moura Cunha, Guilherme Schwartzman, Armin Sci Rep Article We propose a random forest classifier for identifying adequacy of liver MR images using handcrafted (HC) features and deep convolutional neural networks (CNNs), and analyze the relative role of these two components in relation to the training sample size. The HC features, specifically developed for this application, include Gaussian mixture models, Euler characteristic curves and texture analysis. Using HC features outperforms the CNN for smaller sample sizes and with increased interpretability. On the other hand, with enough training data, the combined classifier outperforms the models trained with HC features or CNN features alone. These results illustrate the added value of HC features with respect to CNNs, especially when insufficient data is available, as is often found in clinical studies. Nature Publishing Group UK 2020-11-23 /pmc/articles/PMC7683555/ /pubmed/33230152 http://dx.doi.org/10.1038/s41598-020-77264-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lin, Wenyi
Hasenstab, Kyle
Moura Cunha, Guilherme
Schwartzman, Armin
Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment
title Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment
title_full Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment
title_fullStr Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment
title_full_unstemmed Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment
title_short Comparison of handcrafted features and convolutional neural networks for liver MR image adequacy assessment
title_sort comparison of handcrafted features and convolutional neural networks for liver mr image adequacy assessment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7683555/
https://www.ncbi.nlm.nih.gov/pubmed/33230152
http://dx.doi.org/10.1038/s41598-020-77264-y
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