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Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy
Guanine-rich quadruplex (G-QD) are formed by conversion of nucleotides with specific sequences by stabilization of positively charged K(+) or Na(+). These G-QD structures differentially absorb two-directional (right- and left-handed) circularly polarized light, which can discriminate the parallel or...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7686487/ https://www.ncbi.nlm.nih.gov/pubmed/33235290 http://dx.doi.org/10.1038/s41598-020-77449-5 |
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author | Kim, Raeyeong Youn, Young-Sang Kang, Misook Kim, Eunjoo |
author_facet | Kim, Raeyeong Youn, Young-Sang Kang, Misook Kim, Eunjoo |
author_sort | Kim, Raeyeong |
collection | PubMed |
description | Guanine-rich quadruplex (G-QD) are formed by conversion of nucleotides with specific sequences by stabilization of positively charged K(+) or Na(+). These G-QD structures differentially absorb two-directional (right- and left-handed) circularly polarized light, which can discriminate the parallel or anti-parallel structures of G-QDs. In this study, G-QDs stabilized by Pb(2+) were analyzed by a circular dichroism (CD) spectroscopy to determine Pb(2+) concentration in water samples. Thrombin aptamer (TBA), PS2.M, human telomeric DNA (HTG), AGRO 100, and telomeric related sequence (T2) were studied to verify their applicability as probes for platform- and label-free detection of Pb(2+) in environmental as well as laboratory samples. Among these nucleotides, TBA and PS2.M exhibited higher binding constants for Pb(2+), 1.20–2.04 × 10(6)/M at and 4.58 × 10(4)–1.09 × 10(5)/M at 100 micromolar and 100 mM K(+) concentration, respectively. They also exhibited excellent selectivity for Pb(2+) than for Al(3+), Cu(2+), Ni(2+), Fe(3+), Co(2+), and Cr(2+). When Pb(2+) was spiked into an effluent sample from a wastewater treatment plant (WWTP), its existence was detected by CD spectroscopy following a simple addition of TBA or PS2.M. By the addition of TBA and PS2.M, the Pb(2+) signals were observed in effluent samples over 0.5 micromolar (100 ppb) concentration. Furthermore, PS2.M caused a Pb(2+)-specific absorption band in the effluent sample without spiking of Pb(2+), and could be induced to G-QD structure by the background Pb(2+) concentration in the effluent, 0.159 micromolar concentration (3.30 ppb). Taken together, we propose that TBA and PS2.M are applicable as platform- and label-free detection probes for monitoring Pb(2+) in environmental samples such as discharged effluent from local WWTPs, using CD spectroscopy. |
format | Online Article Text |
id | pubmed-7686487 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76864872020-11-27 Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy Kim, Raeyeong Youn, Young-Sang Kang, Misook Kim, Eunjoo Sci Rep Article Guanine-rich quadruplex (G-QD) are formed by conversion of nucleotides with specific sequences by stabilization of positively charged K(+) or Na(+). These G-QD structures differentially absorb two-directional (right- and left-handed) circularly polarized light, which can discriminate the parallel or anti-parallel structures of G-QDs. In this study, G-QDs stabilized by Pb(2+) were analyzed by a circular dichroism (CD) spectroscopy to determine Pb(2+) concentration in water samples. Thrombin aptamer (TBA), PS2.M, human telomeric DNA (HTG), AGRO 100, and telomeric related sequence (T2) were studied to verify their applicability as probes for platform- and label-free detection of Pb(2+) in environmental as well as laboratory samples. Among these nucleotides, TBA and PS2.M exhibited higher binding constants for Pb(2+), 1.20–2.04 × 10(6)/M at and 4.58 × 10(4)–1.09 × 10(5)/M at 100 micromolar and 100 mM K(+) concentration, respectively. They also exhibited excellent selectivity for Pb(2+) than for Al(3+), Cu(2+), Ni(2+), Fe(3+), Co(2+), and Cr(2+). When Pb(2+) was spiked into an effluent sample from a wastewater treatment plant (WWTP), its existence was detected by CD spectroscopy following a simple addition of TBA or PS2.M. By the addition of TBA and PS2.M, the Pb(2+) signals were observed in effluent samples over 0.5 micromolar (100 ppb) concentration. Furthermore, PS2.M caused a Pb(2+)-specific absorption band in the effluent sample without spiking of Pb(2+), and could be induced to G-QD structure by the background Pb(2+) concentration in the effluent, 0.159 micromolar concentration (3.30 ppb). Taken together, we propose that TBA and PS2.M are applicable as platform- and label-free detection probes for monitoring Pb(2+) in environmental samples such as discharged effluent from local WWTPs, using CD spectroscopy. Nature Publishing Group UK 2020-11-24 /pmc/articles/PMC7686487/ /pubmed/33235290 http://dx.doi.org/10.1038/s41598-020-77449-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kim, Raeyeong Youn, Young-Sang Kang, Misook Kim, Eunjoo Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy |
title | Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy |
title_full | Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy |
title_fullStr | Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy |
title_full_unstemmed | Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy |
title_short | Platform- and label-free detection of lead ions in environmental and laboratory samples using G-quadraplex probes by circular dichroism spectroscopy |
title_sort | platform- and label-free detection of lead ions in environmental and laboratory samples using g-quadraplex probes by circular dichroism spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7686487/ https://www.ncbi.nlm.nih.gov/pubmed/33235290 http://dx.doi.org/10.1038/s41598-020-77449-5 |
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