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The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China

The plant genus Melastoma of the family Melastomataceae is comprised of nine species and one variety in China. Melastoma dodecandrum is the only creeping species of this genus. Previous study has reported the complete chloroplast genome of M. dodecandrum from Guangzhou, China, but there may be some...

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Autores principales: Hao, Yang, Wen, Zhenying, Chen, Bin, Han, Wenchao, Liu, Zhongjian, Peng, Donghui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687374/
https://www.ncbi.nlm.nih.gov/pubmed/33365482
http://dx.doi.org/10.1080/23802359.2019.1624640
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author Hao, Yang
Wen, Zhenying
Chen, Bin
Han, Wenchao
Liu, Zhongjian
Peng, Donghui
author_facet Hao, Yang
Wen, Zhenying
Chen, Bin
Han, Wenchao
Liu, Zhongjian
Peng, Donghui
author_sort Hao, Yang
collection PubMed
description The plant genus Melastoma of the family Melastomataceae is comprised of nine species and one variety in China. Melastoma dodecandrum is the only creeping species of this genus. Previous study has reported the complete chloroplast genome of M. dodecandrum from Guangzhou, China, but there may be some differences between plant populations from different regions. Herein, we reported the complete chloroplast genome of M. dodecandrum from Fuzhou, China, which was assembled from Pacbio and whole genome data was sequenced. The sequence has a circular molecular length of 156,598 bp and contained 129 genes. Phylogenetic analysis indicated that M. dodecandrum was closely related to M. candidum in Melastomataceae. The study aims to provide insights for the future studies on the differences in molecular evolution level between plant populations of M. dodecandrum and taxonomy of Melastoma.
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spelling pubmed-76873742020-12-22 The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China Hao, Yang Wen, Zhenying Chen, Bin Han, Wenchao Liu, Zhongjian Peng, Donghui Mitochondrial DNA B Resour Mitogenome Announcement The plant genus Melastoma of the family Melastomataceae is comprised of nine species and one variety in China. Melastoma dodecandrum is the only creeping species of this genus. Previous study has reported the complete chloroplast genome of M. dodecandrum from Guangzhou, China, but there may be some differences between plant populations from different regions. Herein, we reported the complete chloroplast genome of M. dodecandrum from Fuzhou, China, which was assembled from Pacbio and whole genome data was sequenced. The sequence has a circular molecular length of 156,598 bp and contained 129 genes. Phylogenetic analysis indicated that M. dodecandrum was closely related to M. candidum in Melastomataceae. The study aims to provide insights for the future studies on the differences in molecular evolution level between plant populations of M. dodecandrum and taxonomy of Melastoma. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687374/ /pubmed/33365482 http://dx.doi.org/10.1080/23802359.2019.1624640 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Hao, Yang
Wen, Zhenying
Chen, Bin
Han, Wenchao
Liu, Zhongjian
Peng, Donghui
The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China
title The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China
title_full The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China
title_fullStr The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China
title_full_unstemmed The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China
title_short The re-sequencing and re-assembly of complete chloroplast genome of Melastoma dodecandrum (Melastomataceae) from Fujian, China
title_sort re-sequencing and re-assembly of complete chloroplast genome of melastoma dodecandrum (melastomataceae) from fujian, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687374/
https://www.ncbi.nlm.nih.gov/pubmed/33365482
http://dx.doi.org/10.1080/23802359.2019.1624640
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