Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)

Corydalis trisecta Franch. is an endemic plant found in China. In this study, we presented the first complete chloroplast genome of C. trisecta, which was assembled and characterized based on Illumina pair-end sequencing data. The complete chloroplast genome was 161,410 bp in length, with a GC conte...

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Autores principales: Kanwal, Nazish, Zhang, Xiao, Afzal, Nawal, Yang, Jia, Li, Zhonghu, Zhao, Guifang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687375/
https://www.ncbi.nlm.nih.gov/pubmed/33365510
http://dx.doi.org/10.1080/23802359.2019.1627930
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author Kanwal, Nazish
Zhang, Xiao
Afzal, Nawal
Yang, Jia
Li, Zhonghu
Zhao, Guifang
author_facet Kanwal, Nazish
Zhang, Xiao
Afzal, Nawal
Yang, Jia
Li, Zhonghu
Zhao, Guifang
author_sort Kanwal, Nazish
collection PubMed
description Corydalis trisecta Franch. is an endemic plant found in China. In this study, we presented the first complete chloroplast genome of C. trisecta, which was assembled and characterized based on Illumina pair-end sequencing data. The complete chloroplast genome was 161,410 bp in length, with a GC content of 41.4% in total. Its structure contained a large single copy (LSC) region of 89,127 bp and a small single copy (SSC) region of 16,993 bp, which were separated by a pair of extremely inverted repeats (IRs) of 27,645 bp each, with GC content 39.8, 87.2, and 45.2%, respectively. The phylogenetic analysis indicated that C. triscta was sister to Lamprocapons spectabilis in Papaveraceae.
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spelling pubmed-76873752020-12-22 Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae) Kanwal, Nazish Zhang, Xiao Afzal, Nawal Yang, Jia Li, Zhonghu Zhao, Guifang Mitochondrial DNA B Resour Mitogenome Announcement Corydalis trisecta Franch. is an endemic plant found in China. In this study, we presented the first complete chloroplast genome of C. trisecta, which was assembled and characterized based on Illumina pair-end sequencing data. The complete chloroplast genome was 161,410 bp in length, with a GC content of 41.4% in total. Its structure contained a large single copy (LSC) region of 89,127 bp and a small single copy (SSC) region of 16,993 bp, which were separated by a pair of extremely inverted repeats (IRs) of 27,645 bp each, with GC content 39.8, 87.2, and 45.2%, respectively. The phylogenetic analysis indicated that C. triscta was sister to Lamprocapons spectabilis in Papaveraceae. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687375/ /pubmed/33365510 http://dx.doi.org/10.1080/23802359.2019.1627930 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Kanwal, Nazish
Zhang, Xiao
Afzal, Nawal
Yang, Jia
Li, Zhonghu
Zhao, Guifang
Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)
title Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)
title_full Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)
title_fullStr Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)
title_full_unstemmed Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)
title_short Complete chloroplast genome of a Chinese endemic species Corydalis trisecta Franch. (Papaveraceae)
title_sort complete chloroplast genome of a chinese endemic species corydalis trisecta franch. (papaveraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687375/
https://www.ncbi.nlm.nih.gov/pubmed/33365510
http://dx.doi.org/10.1080/23802359.2019.1627930
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