The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China

Lonicera oblata, a critically endangered species endemic to North China with about 30 wild individuals, has long been ignored for conservation since its publication because of little attention on its living situation. In this study, we characterized the complete chloroplast (cp) genome of L. oblata....

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Autores principales: Zhu, Yi-Xuan, Wu, Yuan-Mi, Shen, Xue-Li, Tong, Ling, Xia, Xiao-Fei, Mu, Xian-Yun, Zhang, Zhi-Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687385/
https://www.ncbi.nlm.nih.gov/pubmed/33365532
http://dx.doi.org/10.1080/23802359.2019.1629344
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author Zhu, Yi-Xuan
Wu, Yuan-Mi
Shen, Xue-Li
Tong, Ling
Xia, Xiao-Fei
Mu, Xian-Yun
Zhang, Zhi-Xiang
author_facet Zhu, Yi-Xuan
Wu, Yuan-Mi
Shen, Xue-Li
Tong, Ling
Xia, Xiao-Fei
Mu, Xian-Yun
Zhang, Zhi-Xiang
author_sort Zhu, Yi-Xuan
collection PubMed
description Lonicera oblata, a critically endangered species endemic to North China with about 30 wild individuals, has long been ignored for conservation since its publication because of little attention on its living situation. In this study, we characterized the complete chloroplast (cp) genome of L. oblata. The cp genome was 155,481 bp in length, included a large single-copy (LSC) region of 89,139 bp, a small single-copy (SSC) region of 18,676 bp, and two inverted repeat (IR) regions of 23,833 bp each. The genome contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic position of L. oblata was also investigated based on cp genome phylogeny of Lonicera representatives. This study is valuable for molecular phylogenetic study and conservation of Lonicera and related taxa.
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spelling pubmed-76873852020-12-22 The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China Zhu, Yi-Xuan Wu, Yuan-Mi Shen, Xue-Li Tong, Ling Xia, Xiao-Fei Mu, Xian-Yun Zhang, Zhi-Xiang Mitochondrial DNA B Resour Mitogenome Announcement Lonicera oblata, a critically endangered species endemic to North China with about 30 wild individuals, has long been ignored for conservation since its publication because of little attention on its living situation. In this study, we characterized the complete chloroplast (cp) genome of L. oblata. The cp genome was 155,481 bp in length, included a large single-copy (LSC) region of 89,139 bp, a small single-copy (SSC) region of 18,676 bp, and two inverted repeat (IR) regions of 23,833 bp each. The genome contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic position of L. oblata was also investigated based on cp genome phylogeny of Lonicera representatives. This study is valuable for molecular phylogenetic study and conservation of Lonicera and related taxa. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687385/ /pubmed/33365532 http://dx.doi.org/10.1080/23802359.2019.1629344 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhu, Yi-Xuan
Wu, Yuan-Mi
Shen, Xue-Li
Tong, Ling
Xia, Xiao-Fei
Mu, Xian-Yun
Zhang, Zhi-Xiang
The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China
title The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China
title_full The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China
title_fullStr The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China
title_full_unstemmed The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China
title_short The complete chloroplast genome of Lonicera oblata, a critically endangered species endemic to North China
title_sort complete chloroplast genome of lonicera oblata, a critically endangered species endemic to north china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687385/
https://www.ncbi.nlm.nih.gov/pubmed/33365532
http://dx.doi.org/10.1080/23802359.2019.1629344
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