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Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China
Lepus comus is the endemic species in China and has been listed on the IUCN Red List in 2013. In this study, we undertook and obtained the complete Lepus comus mitochondrial genome. The circular mitochondrial genome sequence is 17,534 bp in size, containing 13 protein-coding genes (PCGs), 21 transfe...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687388/ https://www.ncbi.nlm.nih.gov/pubmed/33365481 http://dx.doi.org/10.1080/23802359.2019.1624643 |
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author | Huang, Jing Lin, Wang Wu, Dandan Cai, Lifeng Wang, Xiumei Huang, Jianhui |
author_facet | Huang, Jing Lin, Wang Wu, Dandan Cai, Lifeng Wang, Xiumei Huang, Jianhui |
author_sort | Huang, Jing |
collection | PubMed |
description | Lepus comus is the endemic species in China and has been listed on the IUCN Red List in 2013. In this study, we undertook and obtained the complete Lepus comus mitochondrial genome. The circular mitochondrial genome sequence is 17,534 bp in size, containing 13 protein-coding genes (PCGs), 21 transfer RNA (tRNA) genes, 2 ribosome RNA (rRNA) genes and a longer D-loop region of 2,610 bp in length. The base composition of the mtDNA is as follows: 31.5% of A, 29.8% of T, 29.8% of C and 13.3% of G, with a total G + C content of the mtDNA 38.7% and A + T of 61.3%. The phylogenetic Maximum-Likelihood (ML) tree was constructed to validate the taxonomic status of Lepus comus, exhibiting the closest relationship with Lepus tibetanus. The study of the complete Lepus comus mitochondrial genome can provide a reference taxonomic relationships and more basic data for future. |
format | Online Article Text |
id | pubmed-7687388 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76873882020-12-22 Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China Huang, Jing Lin, Wang Wu, Dandan Cai, Lifeng Wang, Xiumei Huang, Jianhui Mitochondrial DNA B Resour Mitogenome Announcement Lepus comus is the endemic species in China and has been listed on the IUCN Red List in 2013. In this study, we undertook and obtained the complete Lepus comus mitochondrial genome. The circular mitochondrial genome sequence is 17,534 bp in size, containing 13 protein-coding genes (PCGs), 21 transfer RNA (tRNA) genes, 2 ribosome RNA (rRNA) genes and a longer D-loop region of 2,610 bp in length. The base composition of the mtDNA is as follows: 31.5% of A, 29.8% of T, 29.8% of C and 13.3% of G, with a total G + C content of the mtDNA 38.7% and A + T of 61.3%. The phylogenetic Maximum-Likelihood (ML) tree was constructed to validate the taxonomic status of Lepus comus, exhibiting the closest relationship with Lepus tibetanus. The study of the complete Lepus comus mitochondrial genome can provide a reference taxonomic relationships and more basic data for future. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687388/ /pubmed/33365481 http://dx.doi.org/10.1080/23802359.2019.1624643 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Huang, Jing Lin, Wang Wu, Dandan Cai, Lifeng Wang, Xiumei Huang, Jianhui Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China |
title | Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China |
title_full | Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China |
title_fullStr | Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China |
title_full_unstemmed | Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China |
title_short | Characterization of the complete mitochondrial genome of Lepus comus, the endemic Lepus in China |
title_sort | characterization of the complete mitochondrial genome of lepus comus, the endemic lepus in china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687388/ https://www.ncbi.nlm.nih.gov/pubmed/33365481 http://dx.doi.org/10.1080/23802359.2019.1624643 |
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