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The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae)
The plant family Moringaceae contains only one genus, Moringa, and Moringa oleifera is widely cultivated for its young seed pods and leaves used as vegetables and for traditional herbal medicine. In this study, we report the complete chloroplast genome of M. oleifera, assembled from whole-genome hig...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687391/ https://www.ncbi.nlm.nih.gov/pubmed/33366334 http://dx.doi.org/10.1080/23802359.2019.1627922 |
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author | Lin, Wen Dai, Seping Chen, Yile Zhou, Yubin Liu, Xiaojuan |
author_facet | Lin, Wen Dai, Seping Chen, Yile Zhou, Yubin Liu, Xiaojuan |
author_sort | Lin, Wen |
collection | PubMed |
description | The plant family Moringaceae contains only one genus, Moringa, and Moringa oleifera is widely cultivated for its young seed pods and leaves used as vegetables and for traditional herbal medicine. In this study, we report the complete chloroplast genome of M. oleifera, assembled from whole-genome high-throughput sequencing reads, as a resource for future studies on the phylogeny and evolution of Moringaceae. The chloroplast genome was 160,600 bp in length, with a large single-copy (LSC) region of 88,577 bp, a small single-copy (SSC) region of 18,883 bp, separated by two inverted repeat (IR) regions of 26,570 bp each. It was predicted to contain 131 genes, with an overall GC content of 36.78%. Phylogenetic analysis of 71 protein-coding sequences of 13 plant plastomes showed that M. oleifera is closest to Carica papaya. |
format | Online Article Text |
id | pubmed-7687391 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76873912020-12-22 The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) Lin, Wen Dai, Seping Chen, Yile Zhou, Yubin Liu, Xiaojuan Mitochondrial DNA B Resour Mitogenome Announcement The plant family Moringaceae contains only one genus, Moringa, and Moringa oleifera is widely cultivated for its young seed pods and leaves used as vegetables and for traditional herbal medicine. In this study, we report the complete chloroplast genome of M. oleifera, assembled from whole-genome high-throughput sequencing reads, as a resource for future studies on the phylogeny and evolution of Moringaceae. The chloroplast genome was 160,600 bp in length, with a large single-copy (LSC) region of 88,577 bp, a small single-copy (SSC) region of 18,883 bp, separated by two inverted repeat (IR) regions of 26,570 bp each. It was predicted to contain 131 genes, with an overall GC content of 36.78%. Phylogenetic analysis of 71 protein-coding sequences of 13 plant plastomes showed that M. oleifera is closest to Carica papaya. Taylor & Francis 2019-11-18 /pmc/articles/PMC7687391/ /pubmed/33366334 http://dx.doi.org/10.1080/23802359.2019.1627922 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Lin, Wen Dai, Seping Chen, Yile Zhou, Yubin Liu, Xiaojuan The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) |
title | The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) |
title_full | The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) |
title_fullStr | The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) |
title_short | The complete chloroplast genome sequence of Moringa oleifera Lam. (Moringaceae) |
title_sort | complete chloroplast genome sequence of moringa oleifera lam. (moringaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687391/ https://www.ncbi.nlm.nih.gov/pubmed/33366334 http://dx.doi.org/10.1080/23802359.2019.1627922 |
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