Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi

Osmanthus cooperi is an evergreen ornamental plant belonging to the olive family. In this study, its complete chloroplast genome was assembled from the whole genome Illumina sequencing data. The circular genome is 155,262 bp long, and comprises a pair of inverted repeat regions (IRs, 25,685 bp each)...

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Autores principales: Wang, Xiaofei, Cai, Fuyue, Zhang, Cheng, Zhang, Min, Li, Yongfu, Duan, Yifan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687408/
https://www.ncbi.nlm.nih.gov/pubmed/33365521
http://dx.doi.org/10.1080/23802359.2019.1627951
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author Wang, Xiaofei
Cai, Fuyue
Zhang, Cheng
Zhang, Min
Li, Yongfu
Duan, Yifan
author_facet Wang, Xiaofei
Cai, Fuyue
Zhang, Cheng
Zhang, Min
Li, Yongfu
Duan, Yifan
author_sort Wang, Xiaofei
collection PubMed
description Osmanthus cooperi is an evergreen ornamental plant belonging to the olive family. In this study, its complete chloroplast genome was assembled from the whole genome Illumina sequencing data. The circular genome is 155,262 bp long, and comprises a pair of inverted repeat regions (IRs, 25,685 bp each), a large single-copy region (LSC, 86,525 bp), and a small single-copy region (SSC, 17,367 bp). It encodes 132 genes, including 8 rRNA genes, 36 tRNAs genes, and 88 protein-coding genes. The GC content of O. cooperi cp genome is 37.8%. Phylogenetic analysis indicates that O. cooperi is close to O. fragrans in Oleaceae.
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spelling pubmed-76874082020-12-22 Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi Wang, Xiaofei Cai, Fuyue Zhang, Cheng Zhang, Min Li, Yongfu Duan, Yifan Mitochondrial DNA B Resour Mitogenome Announcement Osmanthus cooperi is an evergreen ornamental plant belonging to the olive family. In this study, its complete chloroplast genome was assembled from the whole genome Illumina sequencing data. The circular genome is 155,262 bp long, and comprises a pair of inverted repeat regions (IRs, 25,685 bp each), a large single-copy region (LSC, 86,525 bp), and a small single-copy region (SSC, 17,367 bp). It encodes 132 genes, including 8 rRNA genes, 36 tRNAs genes, and 88 protein-coding genes. The GC content of O. cooperi cp genome is 37.8%. Phylogenetic analysis indicates that O. cooperi is close to O. fragrans in Oleaceae. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687408/ /pubmed/33365521 http://dx.doi.org/10.1080/23802359.2019.1627951 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Xiaofei
Cai, Fuyue
Zhang, Cheng
Zhang, Min
Li, Yongfu
Duan, Yifan
Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
title Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
title_full Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
title_fullStr Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
title_full_unstemmed Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
title_short Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
title_sort characterization of the complete chloroplast genome of the ornamental plant osmanthus cooperi
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687408/
https://www.ncbi.nlm.nih.gov/pubmed/33365521
http://dx.doi.org/10.1080/23802359.2019.1627951
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