Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)

The first complete mitochondrial genome sequence of Ailia coila from Bangladesh was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. The constructed circular mitogenome for A. coila was 16,565 bp in length which harbored the canonical 13 protein-coding genes, 2...

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Autores principales: Alam, Md. Jobaidul, Andriyono, Sapto, Lee, Soo Rin, Hossain, Mostafa A. R., Eunus, A. T. M., Hassan, Md. Tawheed, Kim, Hyun-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687414/
https://www.ncbi.nlm.nih.gov/pubmed/33365500
http://dx.doi.org/10.1080/23802359.2019.1627942
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author Alam, Md. Jobaidul
Andriyono, Sapto
Lee, Soo Rin
Hossain, Mostafa A. R.
Eunus, A. T. M.
Hassan, Md. Tawheed
Kim, Hyun-Woo
author_facet Alam, Md. Jobaidul
Andriyono, Sapto
Lee, Soo Rin
Hossain, Mostafa A. R.
Eunus, A. T. M.
Hassan, Md. Tawheed
Kim, Hyun-Woo
author_sort Alam, Md. Jobaidul
collection PubMed
description The first complete mitochondrial genome sequence of Ailia coila from Bangladesh was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. The constructed circular mitogenome for A. coila was 16,565 bp in length which harbored the canonical 13 protein-coding genes, 22 tRNAs, 2 rRNAs. Two non-coding regions, control region, D-loop (927 bp), and origin of light strand replication, O(L) (30 bp) were also well conserved in the mitogenome. Among the currently reported mitochondrial genomes in the order Siluriformes, A. coila was most closely related to Eutropiichthys vacha (AB919123) with 85.63% sequence identity.
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spelling pubmed-76874142020-12-22 Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae) Alam, Md. Jobaidul Andriyono, Sapto Lee, Soo Rin Hossain, Mostafa A. R. Eunus, A. T. M. Hassan, Md. Tawheed Kim, Hyun-Woo Mitochondrial DNA B Resour Mitogenome Announcement The first complete mitochondrial genome sequence of Ailia coila from Bangladesh was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. The constructed circular mitogenome for A. coila was 16,565 bp in length which harbored the canonical 13 protein-coding genes, 22 tRNAs, 2 rRNAs. Two non-coding regions, control region, D-loop (927 bp), and origin of light strand replication, O(L) (30 bp) were also well conserved in the mitogenome. Among the currently reported mitochondrial genomes in the order Siluriformes, A. coila was most closely related to Eutropiichthys vacha (AB919123) with 85.63% sequence identity. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687414/ /pubmed/33365500 http://dx.doi.org/10.1080/23802359.2019.1627942 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Alam, Md. Jobaidul
Andriyono, Sapto
Lee, Soo Rin
Hossain, Mostafa A. R.
Eunus, A. T. M.
Hassan, Md. Tawheed
Kim, Hyun-Woo
Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)
title Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)
title_full Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)
title_fullStr Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)
title_full_unstemmed Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)
title_short Characterization of the complete mitochondrial genome of Gangetic ailia, Ailia coila (Siluriformes: Ailiidae)
title_sort characterization of the complete mitochondrial genome of gangetic ailia, ailia coila (siluriformes: ailiidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687414/
https://www.ncbi.nlm.nih.gov/pubmed/33365500
http://dx.doi.org/10.1080/23802359.2019.1627942
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