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The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae)
The complete chloroplast genome sequence of Kuepferia otophora, a flowering plant occurring in Hengduan Mountains with high altitudes, is determined in this study. The plastome is 139,684 bp in length, with one large single-copy region of 76,787 bp, one small single-copy region of 16,635 bp, and two...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687425/ https://www.ncbi.nlm.nih.gov/pubmed/33365518 http://dx.doi.org/10.1080/23802359.2019.1627947 |
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author | Ma, Yazhen Chen, Chunlin Zhang, Lei |
author_facet | Ma, Yazhen Chen, Chunlin Zhang, Lei |
author_sort | Ma, Yazhen |
collection | PubMed |
description | The complete chloroplast genome sequence of Kuepferia otophora, a flowering plant occurring in Hengduan Mountains with high altitudes, is determined in this study. The plastome is 139,684 bp in length, with one large single-copy region of 76,787 bp, one small single-copy region of 16,635 bp, and two inverted repeat (IR) regions of 23,131 bp. It contains 128 genes, including 83 protein-coding, 8 ribosomal RNA, and 37 transfer RNA genes. Phylogenetic tree shows that this species is a sister to the clade of genus Gentiana. The first published plastome within Kuepferia provides significant insight for elucidating the phylogenetic relationship of taxa within tribe Gentianeae. |
format | Online Article Text |
id | pubmed-7687425 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76874252020-12-22 The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) Ma, Yazhen Chen, Chunlin Zhang, Lei Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Kuepferia otophora, a flowering plant occurring in Hengduan Mountains with high altitudes, is determined in this study. The plastome is 139,684 bp in length, with one large single-copy region of 76,787 bp, one small single-copy region of 16,635 bp, and two inverted repeat (IR) regions of 23,131 bp. It contains 128 genes, including 83 protein-coding, 8 ribosomal RNA, and 37 transfer RNA genes. Phylogenetic tree shows that this species is a sister to the clade of genus Gentiana. The first published plastome within Kuepferia provides significant insight for elucidating the phylogenetic relationship of taxa within tribe Gentianeae. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687425/ /pubmed/33365518 http://dx.doi.org/10.1080/23802359.2019.1627947 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Ma, Yazhen Chen, Chunlin Zhang, Lei The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
title | The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
title_full | The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
title_fullStr | The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
title_short | The complete chloroplast genome sequence of an Alpine flowering plant Kuepferia otophora (Gentianaceae) |
title_sort | complete chloroplast genome sequence of an alpine flowering plant kuepferia otophora (gentianaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687425/ https://www.ncbi.nlm.nih.gov/pubmed/33365518 http://dx.doi.org/10.1080/23802359.2019.1627947 |
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