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Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae

The complete mitogenome sequence of Dentex hypselosomus was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of D. hypselos...

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Autores principales: Wu, Ren-Xie, Zhai, Yun, Niu, Su-Fang, Liu, Jing, Miao, Ben-Ben, Liu, Fang, Ou, Chun-Xiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687427/
https://www.ncbi.nlm.nih.gov/pubmed/33365577
http://dx.doi.org/10.1080/23802359.2019.1637298
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author Wu, Ren-Xie
Zhai, Yun
Niu, Su-Fang
Liu, Jing
Miao, Ben-Ben
Liu, Fang
Ou, Chun-Xiao
author_facet Wu, Ren-Xie
Zhai, Yun
Niu, Su-Fang
Liu, Jing
Miao, Ben-Ben
Liu, Fang
Ou, Chun-Xiao
author_sort Wu, Ren-Xie
collection PubMed
description The complete mitogenome sequence of Dentex hypselosomus was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of D. hypselosomus encodes 37 canonical mitochondrial genes, two non-coding regions, an L-strand replication region (OL), and a control region (D-loop). The D-loop contained termination sequence domain (TAS), central conserved domains (CSB-F, CSB-E, CSB-D, CSB-C, and CSB-A), and conserved sequence blocks (CSB-1, CSB-2, and CSB-3). Phylogenetic analysis of nine sparid species well supported the phylogenetic position of D. hypselosomus and revealed the phylogenetic relationship of the family Sparidae at the level of mitochondrial genomes.
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spelling pubmed-76874272020-12-22 Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae Wu, Ren-Xie Zhai, Yun Niu, Su-Fang Liu, Jing Miao, Ben-Ben Liu, Fang Ou, Chun-Xiao Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome sequence of Dentex hypselosomus was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of D. hypselosomus encodes 37 canonical mitochondrial genes, two non-coding regions, an L-strand replication region (OL), and a control region (D-loop). The D-loop contained termination sequence domain (TAS), central conserved domains (CSB-F, CSB-E, CSB-D, CSB-C, and CSB-A), and conserved sequence blocks (CSB-1, CSB-2, and CSB-3). Phylogenetic analysis of nine sparid species well supported the phylogenetic position of D. hypselosomus and revealed the phylogenetic relationship of the family Sparidae at the level of mitochondrial genomes. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687427/ /pubmed/33365577 http://dx.doi.org/10.1080/23802359.2019.1637298 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Ren-Xie
Zhai, Yun
Niu, Su-Fang
Liu, Jing
Miao, Ben-Ben
Liu, Fang
Ou, Chun-Xiao
Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
title Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
title_full Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
title_fullStr Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
title_full_unstemmed Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
title_short Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
title_sort complete mitochondrial genome of yellowback seabream, dentex hypselosomus and phylogenetic analysis of the family sparidae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687427/
https://www.ncbi.nlm.nih.gov/pubmed/33365577
http://dx.doi.org/10.1080/23802359.2019.1637298
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