Cargando…
Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae
The complete mitogenome sequence of Dentex hypselosomus was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of D. hypselos...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687427/ https://www.ncbi.nlm.nih.gov/pubmed/33365577 http://dx.doi.org/10.1080/23802359.2019.1637298 |
_version_ | 1783613516016517120 |
---|---|
author | Wu, Ren-Xie Zhai, Yun Niu, Su-Fang Liu, Jing Miao, Ben-Ben Liu, Fang Ou, Chun-Xiao |
author_facet | Wu, Ren-Xie Zhai, Yun Niu, Su-Fang Liu, Jing Miao, Ben-Ben Liu, Fang Ou, Chun-Xiao |
author_sort | Wu, Ren-Xie |
collection | PubMed |
description | The complete mitogenome sequence of Dentex hypselosomus was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of D. hypselosomus encodes 37 canonical mitochondrial genes, two non-coding regions, an L-strand replication region (OL), and a control region (D-loop). The D-loop contained termination sequence domain (TAS), central conserved domains (CSB-F, CSB-E, CSB-D, CSB-C, and CSB-A), and conserved sequence blocks (CSB-1, CSB-2, and CSB-3). Phylogenetic analysis of nine sparid species well supported the phylogenetic position of D. hypselosomus and revealed the phylogenetic relationship of the family Sparidae at the level of mitochondrial genomes. |
format | Online Article Text |
id | pubmed-7687427 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76874272020-12-22 Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae Wu, Ren-Xie Zhai, Yun Niu, Su-Fang Liu, Jing Miao, Ben-Ben Liu, Fang Ou, Chun-Xiao Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome sequence of Dentex hypselosomus was amplified by designing 15 primer pairs. The circle genome was 16,618 bp in size and the overall base composition was 27.04% of A, 26.38% of T, 17.08% of G, and 29.50 of C, with significant anti-G bias. The complete mitogenome of D. hypselosomus encodes 37 canonical mitochondrial genes, two non-coding regions, an L-strand replication region (OL), and a control region (D-loop). The D-loop contained termination sequence domain (TAS), central conserved domains (CSB-F, CSB-E, CSB-D, CSB-C, and CSB-A), and conserved sequence blocks (CSB-1, CSB-2, and CSB-3). Phylogenetic analysis of nine sparid species well supported the phylogenetic position of D. hypselosomus and revealed the phylogenetic relationship of the family Sparidae at the level of mitochondrial genomes. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687427/ /pubmed/33365577 http://dx.doi.org/10.1080/23802359.2019.1637298 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wu, Ren-Xie Zhai, Yun Niu, Su-Fang Liu, Jing Miao, Ben-Ben Liu, Fang Ou, Chun-Xiao Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae |
title | Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae |
title_full | Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae |
title_fullStr | Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae |
title_full_unstemmed | Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae |
title_short | Complete mitochondrial genome of yellowback seabream, Dentex hypselosomus and phylogenetic analysis of the family Sparidae |
title_sort | complete mitochondrial genome of yellowback seabream, dentex hypselosomus and phylogenetic analysis of the family sparidae |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687427/ https://www.ncbi.nlm.nih.gov/pubmed/33365577 http://dx.doi.org/10.1080/23802359.2019.1637298 |
work_keys_str_mv | AT wurenxie completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae AT zhaiyun completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae AT niusufang completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae AT liujing completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae AT miaobenben completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae AT liufang completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae AT ouchunxiao completemitochondrialgenomeofyellowbackseabreamdentexhypselosomusandphylogeneticanalysisofthefamilysparidae |