Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）

Cymbidium ensifolium is one of the most economical and ornamental significant orchids. It’s facing serious genetic resources loss and habitat fragmentation. A conservation strategy is therefore imperative for this endangered orchid. Here, we report on the first complete chloroplast (cp) genome of C....

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Autores principales: Jiang, Yu-Ting, Lin, Ru-Qiang, Liu, Bin, Zeng, Qin-Meng, Liu, Zhong-Jian, Chen, Shi-Pin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687436/
https://www.ncbi.nlm.nih.gov/pubmed/33365490
http://dx.doi.org/10.1080/23802359.2019.1624637
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author Jiang, Yu-Ting
Lin, Ru-Qiang
Liu, Bin
Zeng, Qin-Meng
Liu, Zhong-Jian
Chen, Shi-Pin
author_facet Jiang, Yu-Ting
Lin, Ru-Qiang
Liu, Bin
Zeng, Qin-Meng
Liu, Zhong-Jian
Chen, Shi-Pin
author_sort Jiang, Yu-Ting
collection PubMed
description Cymbidium ensifolium is one of the most economical and ornamental significant orchids. It’s facing serious genetic resources loss and habitat fragmentation. A conservation strategy is therefore imperative for this endangered orchid. Here, we report on the first complete chloroplast (cp) genome of C. ensifolium. Its full-length of 150,257 bp include large single-copy (LSC) region of 85,110 bp, small single-copy (SSC) region of 13,761 bp, and a pair of invert repeats (IR) regions of 25,692 bp. Plastid genome contain 137 genes, 78 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Cymbidium ensifolium was sister to C. sinense, Cy. Tortisepalum, and C. kanran. The cp genome will help for further research and conservation of C. ensifolium.
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spelling pubmed-76874362020-12-22 Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae） Jiang, Yu-Ting Lin, Ru-Qiang Liu, Bin Zeng, Qin-Meng Liu, Zhong-Jian Chen, Shi-Pin Mitochondrial DNA B Resour Mitogenome Announcement Cymbidium ensifolium is one of the most economical and ornamental significant orchids. It’s facing serious genetic resources loss and habitat fragmentation. A conservation strategy is therefore imperative for this endangered orchid. Here, we report on the first complete chloroplast (cp) genome of C. ensifolium. Its full-length of 150,257 bp include large single-copy (LSC) region of 85,110 bp, small single-copy (SSC) region of 13,761 bp, and a pair of invert repeats (IR) regions of 25,692 bp. Plastid genome contain 137 genes, 78 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Cymbidium ensifolium was sister to C. sinense, Cy. Tortisepalum, and C. kanran. The cp genome will help for further research and conservation of C. ensifolium. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687436/ /pubmed/33365490 http://dx.doi.org/10.1080/23802359.2019.1624637 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Jiang, Yu-Ting
Lin, Ru-Qiang
Liu, Bin
Zeng, Qin-Meng
Liu, Zhong-Jian
Chen, Shi-Pin
Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）
title Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）
title_full Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）
title_fullStr Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）
title_full_unstemmed Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）
title_short Complete chloroplast genome of Cymbidium ensifolium（Orchidaceae）
title_sort complete chloroplast genome of cymbidium ensifolium（orchidaceae）
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687436/
https://www.ncbi.nlm.nih.gov/pubmed/33365490
http://dx.doi.org/10.1080/23802359.2019.1624637
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