The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China

Calanthe arcuata is an endemic terrestrial orchid in China with high value of ornament and breeding. Here, we reported the first complete chloroplast genome of this plant in this research. The circular genome is 158,735 bp in length and includes large single-copy (LSC) region of 87,348 bp, small sin...

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Autores principales: Zhong, Hui, Shen, Li-Ming, Liu, Hai-Ping, Liu, Zhong-Jian, Wu, Sha-Sha, Zhai, Jun-Wen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687439/
https://www.ncbi.nlm.nih.gov/pubmed/33365656
http://dx.doi.org/10.1080/23802359.2019.1639561
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author Zhong, Hui
Shen, Li-Ming
Liu, Hai-Ping
Liu, Zhong-Jian
Wu, Sha-Sha
Zhai, Jun-Wen
author_facet Zhong, Hui
Shen, Li-Ming
Liu, Hai-Ping
Liu, Zhong-Jian
Wu, Sha-Sha
Zhai, Jun-Wen
author_sort Zhong, Hui
collection PubMed
description Calanthe arcuata is an endemic terrestrial orchid in China with high value of ornament and breeding. Here, we reported the first complete chloroplast genome of this plant in this research. The circular genome is 158,735 bp in length and includes large single-copy (LSC) region of 87,348 bp, small single-copy (SSC) region of 18,489 bp, and a pair of invert repeats (IR) regions of 26,449 bp. It contains 136 genes, including 88 protein-coding (PCG), 38 transfer RNA (tRNA), and eight ribosomal RNA (rRNA) gene. The phylogenetic analysis indicated that C. arcuata is the sister to C. davidii and C. triplicata.
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spelling pubmed-76874392020-12-22 The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China Zhong, Hui Shen, Li-Ming Liu, Hai-Ping Liu, Zhong-Jian Wu, Sha-Sha Zhai, Jun-Wen Mitochondrial DNA B Resour Mitogenome Announcement Calanthe arcuata is an endemic terrestrial orchid in China with high value of ornament and breeding. Here, we reported the first complete chloroplast genome of this plant in this research. The circular genome is 158,735 bp in length and includes large single-copy (LSC) region of 87,348 bp, small single-copy (SSC) region of 18,489 bp, and a pair of invert repeats (IR) regions of 26,449 bp. It contains 136 genes, including 88 protein-coding (PCG), 38 transfer RNA (tRNA), and eight ribosomal RNA (rRNA) gene. The phylogenetic analysis indicated that C. arcuata is the sister to C. davidii and C. triplicata. Taylor & Francis 2019-07-18 /pmc/articles/PMC7687439/ /pubmed/33365656 http://dx.doi.org/10.1080/23802359.2019.1639561 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhong, Hui
Shen, Li-Ming
Liu, Hai-Ping
Liu, Zhong-Jian
Wu, Sha-Sha
Zhai, Jun-Wen
The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China
title The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China
title_full The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China
title_fullStr The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China
title_full_unstemmed The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China
title_short The complete chloroplast genome of Calanthe arcuata, an endemic terrestrial orchid in China
title_sort complete chloroplast genome of calanthe arcuata, an endemic terrestrial orchid in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687439/
https://www.ncbi.nlm.nih.gov/pubmed/33365656
http://dx.doi.org/10.1080/23802359.2019.1639561
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