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The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)

The complete mitochondrial DNA genome of the Endangered Spotted Greenshank, Tringa guttifer, was detected using phenol–chloroform extraction procedure and polymerase chain reaction method. It is a circular molecule of 16,935 bp in size, exhibits the typical structure of mitochondrial genomes of Char...

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Detalles Bibliográficos
Autores principales: Liu, Wei, He, Yuxiao, Ding, Jingjing, Chang, Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687452/
https://www.ncbi.nlm.nih.gov/pubmed/33365540
http://dx.doi.org/10.1080/23802359.2019.1629349
Descripción
Sumario:The complete mitochondrial DNA genome of the Endangered Spotted Greenshank, Tringa guttifer, was detected using phenol–chloroform extraction procedure and polymerase chain reaction method. It is a circular molecule of 16,935 bp in size, exhibits the typical structure of mitochondrial genomes of Charadriiformes, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. Overall base composition of the complete mitochondrial DNA is A (31.7%), T (25.5%), C (29.5%), and G (13.3%), the percentage of A and T (57.2%) is higher than G and C. The phylogenetic relationships of 34 species were reconstructed using the maximum-likelihood and Bayesian inference, and unravel T. guttifer is close to T. semipalmata.