The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)

The complete mitochondrial DNA genome of the Endangered Spotted Greenshank, Tringa guttifer, was detected using phenol–chloroform extraction procedure and polymerase chain reaction method. It is a circular molecule of 16,935 bp in size, exhibits the typical structure of mitochondrial genomes of Char...

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Autores principales: Liu, Wei, He, Yuxiao, Ding, Jingjing, Chang, Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687452/
https://www.ncbi.nlm.nih.gov/pubmed/33365540
http://dx.doi.org/10.1080/23802359.2019.1629349
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author Liu, Wei
He, Yuxiao
Ding, Jingjing
Chang, Qing
author_facet Liu, Wei
He, Yuxiao
Ding, Jingjing
Chang, Qing
author_sort Liu, Wei
collection PubMed
description The complete mitochondrial DNA genome of the Endangered Spotted Greenshank, Tringa guttifer, was detected using phenol–chloroform extraction procedure and polymerase chain reaction method. It is a circular molecule of 16,935 bp in size, exhibits the typical structure of mitochondrial genomes of Charadriiformes, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. Overall base composition of the complete mitochondrial DNA is A (31.7%), T (25.5%), C (29.5%), and G (13.3%), the percentage of A and T (57.2%) is higher than G and C. The phylogenetic relationships of 34 species were reconstructed using the maximum-likelihood and Bayesian inference, and unravel T. guttifer is close to T. semipalmata.
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spelling pubmed-76874522020-12-22 The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae) Liu, Wei He, Yuxiao Ding, Jingjing Chang, Qing Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial DNA genome of the Endangered Spotted Greenshank, Tringa guttifer, was detected using phenol–chloroform extraction procedure and polymerase chain reaction method. It is a circular molecule of 16,935 bp in size, exhibits the typical structure of mitochondrial genomes of Charadriiformes, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. Overall base composition of the complete mitochondrial DNA is A (31.7%), T (25.5%), C (29.5%), and G (13.3%), the percentage of A and T (57.2%) is higher than G and C. The phylogenetic relationships of 34 species were reconstructed using the maximum-likelihood and Bayesian inference, and unravel T. guttifer is close to T. semipalmata. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687452/ /pubmed/33365540 http://dx.doi.org/10.1080/23802359.2019.1629349 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Liu, Wei
He, Yuxiao
Ding, Jingjing
Chang, Qing
The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)
title The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)
title_full The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)
title_fullStr The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)
title_full_unstemmed The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)
title_short The complete mitochondrial genome of the Spotted Greenshank Tringa guttifer (Charadriiforemes: Charadriidae)
title_sort complete mitochondrial genome of the spotted greenshank tringa guttifer (charadriiforemes: charadriidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687452/
https://www.ncbi.nlm.nih.gov/pubmed/33365540
http://dx.doi.org/10.1080/23802359.2019.1629349
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