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Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus
Aspergillus pseudoglaucus is a xerophilic filamentous fungus which can produce various secondary metabolites. Here, we reported the complete mitochondrial genome sequence of A. pseudoglaucus isolated from Meju, a soybean brick in Korea. Its mitochondrial genome was successfully assembled from raw re...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687513/ https://www.ncbi.nlm.nih.gov/pubmed/33365569 http://dx.doi.org/10.1080/23802359.2019.1586468 |
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author | Park, Jongsun Kwon, Woochan Huang, Xiaoxiao Mageswari, Anbazhagan Heo, In-Beom Han, Kap-Hoon Hong, Seung-Beom |
author_facet | Park, Jongsun Kwon, Woochan Huang, Xiaoxiao Mageswari, Anbazhagan Heo, In-Beom Han, Kap-Hoon Hong, Seung-Beom |
author_sort | Park, Jongsun |
collection | PubMed |
description | Aspergillus pseudoglaucus is a xerophilic filamentous fungus which can produce various secondary metabolites. Here, we reported the complete mitochondrial genome sequence of A. pseudoglaucus isolated from Meju, a soybean brick in Korea. Its mitochondrial genome was successfully assembled from raw reads sequenced using MiSeq by Velvet and SOAPGapCloser. Total length of the mitochondrial genome is 53,882 bp, which is third longest among known Aspergillus mitochondrial genomes and encoded 58 genes (30 protein-coding genes including hypothetical ORFs, two rRNAs, and 26 tRNAs). Nucleotide sequence of coding regions takes over 66.6% and overall GC content is 27.8%. Phylogenetic trees present that A. pseudoglaucus is located outside of section Nidulantes. Additional researches will be required for clarifying phylogenetic position of section Aspergillus. |
format | Online Article Text |
id | pubmed-7687513 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76875132020-12-22 Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus Park, Jongsun Kwon, Woochan Huang, Xiaoxiao Mageswari, Anbazhagan Heo, In-Beom Han, Kap-Hoon Hong, Seung-Beom Mitochondrial DNA B Resour Mitogenome Announcement Aspergillus pseudoglaucus is a xerophilic filamentous fungus which can produce various secondary metabolites. Here, we reported the complete mitochondrial genome sequence of A. pseudoglaucus isolated from Meju, a soybean brick in Korea. Its mitochondrial genome was successfully assembled from raw reads sequenced using MiSeq by Velvet and SOAPGapCloser. Total length of the mitochondrial genome is 53,882 bp, which is third longest among known Aspergillus mitochondrial genomes and encoded 58 genes (30 protein-coding genes including hypothetical ORFs, two rRNAs, and 26 tRNAs). Nucleotide sequence of coding regions takes over 66.6% and overall GC content is 27.8%. Phylogenetic trees present that A. pseudoglaucus is located outside of section Nidulantes. Additional researches will be required for clarifying phylogenetic position of section Aspergillus. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687513/ /pubmed/33365569 http://dx.doi.org/10.1080/23802359.2019.1586468 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Park, Jongsun Kwon, Woochan Huang, Xiaoxiao Mageswari, Anbazhagan Heo, In-Beom Han, Kap-Hoon Hong, Seung-Beom Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus |
title | Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus |
title_full | Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus |
title_fullStr | Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus |
title_full_unstemmed | Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus |
title_short | Complete mitochondrial genome sequence of a xerophilic fungus, Aspergillus pseudoglaucus |
title_sort | complete mitochondrial genome sequence of a xerophilic fungus, aspergillus pseudoglaucus |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687513/ https://www.ncbi.nlm.nih.gov/pubmed/33365569 http://dx.doi.org/10.1080/23802359.2019.1586468 |
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