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The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus)
We used NGS technologies to resequence the complete mitochondrial genome of (Epinephelus fuscoguttatus). The complete mitochondrial genome of the breed Ningbo brown-marbled grouper is a 16,373 bp circular molecule, which contains 37 typical mitochondrial genes (13 protein-coding genes, two rRNAs, an...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687516/ https://www.ncbi.nlm.nih.gov/pubmed/33365430 http://dx.doi.org/10.1080/23802359.2019.1623108 |
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author | Liu, Gang Gong, Zhizhong Li, Qingyue |
author_facet | Liu, Gang Gong, Zhizhong Li, Qingyue |
author_sort | Liu, Gang |
collection | PubMed |
description | We used NGS technologies to resequence the complete mitochondrial genome of (Epinephelus fuscoguttatus). The complete mitochondrial genome of the breed Ningbo brown-marbled grouper is a 16,373 bp circular molecule, which contains 37 typical mitochondrial genes (13 protein-coding genes, two rRNAs, and 22 tRNAs) and a D-loop. Its gene arrangement pattern is the same as the accession no. KP013758. Comparing to accession no. KP013758 sequence, the D-loop region is much shorter. ATG is the most common start codon, and TAA is the most common stop codons; the 12S rRNA and 16S rRNA are located between the tRNA(Phe) and tRNA(Leu) genes and are separated by the tRNA(Val) gene. Phylogenetic trees indicated E. fuscoguttatus has close relative with Epinephelus coioides and Epinephelus malabaricus. |
format | Online Article Text |
id | pubmed-7687516 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76875162020-12-22 The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) Liu, Gang Gong, Zhizhong Li, Qingyue Mitochondrial DNA B Resour Mitogenome Announcement We used NGS technologies to resequence the complete mitochondrial genome of (Epinephelus fuscoguttatus). The complete mitochondrial genome of the breed Ningbo brown-marbled grouper is a 16,373 bp circular molecule, which contains 37 typical mitochondrial genes (13 protein-coding genes, two rRNAs, and 22 tRNAs) and a D-loop. Its gene arrangement pattern is the same as the accession no. KP013758. Comparing to accession no. KP013758 sequence, the D-loop region is much shorter. ATG is the most common start codon, and TAA is the most common stop codons; the 12S rRNA and 16S rRNA are located between the tRNA(Phe) and tRNA(Leu) genes and are separated by the tRNA(Val) gene. Phylogenetic trees indicated E. fuscoguttatus has close relative with Epinephelus coioides and Epinephelus malabaricus. Taylor & Francis 2019-07-10 /pmc/articles/PMC7687516/ /pubmed/33365430 http://dx.doi.org/10.1080/23802359.2019.1623108 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Liu, Gang Gong, Zhizhong Li, Qingyue The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) |
title | The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) |
title_full | The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) |
title_fullStr | The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) |
title_full_unstemmed | The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) |
title_short | The complete mitochondrial genome of the breed Ningbo brown-marbled grouper (Epinephelus fuscoguttatus) |
title_sort | complete mitochondrial genome of the breed ningbo brown-marbled grouper (epinephelus fuscoguttatus) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687516/ https://www.ncbi.nlm.nih.gov/pubmed/33365430 http://dx.doi.org/10.1080/23802359.2019.1623108 |
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