Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)

We report the complete mitogenome of Hydrophis cyanocinctus, which is 17,750 bp in size and includes 13 protein-coding (PCGs), 2 rRNA genes, 22 tRNA genes, and 2 control regions. PCGs, with 13 genes, is 11,427 bp in length. All PCGs use ATN as the typical start codon except COX1 with GTG; the TAG wa...

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Autores principales: Qiu, Qingbo, Liu, Qize, Zhao, Yifan, Du, Yu, Lin, Chixian, Ji, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687521/
https://www.ncbi.nlm.nih.gov/pubmed/33365528
http://dx.doi.org/10.1080/23802359.2019.1630334
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author Qiu, Qingbo
Liu, Qize
Zhao, Yifan
Du, Yu
Lin, Chixian
Ji, Xiang
author_facet Qiu, Qingbo
Liu, Qize
Zhao, Yifan
Du, Yu
Lin, Chixian
Ji, Xiang
author_sort Qiu, Qingbo
collection PubMed
description We report the complete mitogenome of Hydrophis cyanocinctus, which is 17,750 bp in size and includes 13 protein-coding (PCGs), 2 rRNA genes, 22 tRNA genes, and 2 control regions. PCGs, with 13 genes, is 11,427 bp in length. All PCGs use ATN as the typical start codon except COX1 with GTG; the TAG was found as the stop codon in ND1 and ND2, the AGA was found as the stop codon in COI and ND6, the TAA was found as the stop codon in ATP8, ATP6, ND4L, ND5 and Cytb; while other 3 PCGs stop with a single T. Phylogeny reconstructed using the Bayesian inference (BI) method with 13 PCGs indicates the presence of H. cyanocinctus at the root of Laticaudinae.
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spelling pubmed-76875212020-12-22 Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae) Qiu, Qingbo Liu, Qize Zhao, Yifan Du, Yu Lin, Chixian Ji, Xiang Mitochondrial DNA B Resour Mitogenome Announcement We report the complete mitogenome of Hydrophis cyanocinctus, which is 17,750 bp in size and includes 13 protein-coding (PCGs), 2 rRNA genes, 22 tRNA genes, and 2 control regions. PCGs, with 13 genes, is 11,427 bp in length. All PCGs use ATN as the typical start codon except COX1 with GTG; the TAG was found as the stop codon in ND1 and ND2, the AGA was found as the stop codon in COI and ND6, the TAA was found as the stop codon in ATP8, ATP6, ND4L, ND5 and Cytb; while other 3 PCGs stop with a single T. Phylogeny reconstructed using the Bayesian inference (BI) method with 13 PCGs indicates the presence of H. cyanocinctus at the root of Laticaudinae. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687521/ /pubmed/33365528 http://dx.doi.org/10.1080/23802359.2019.1630334 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Qiu, Qingbo
Liu, Qize
Zhao, Yifan
Du, Yu
Lin, Chixian
Ji, Xiang
Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)
title Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)
title_full Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)
title_fullStr Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)
title_full_unstemmed Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)
title_short Next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (Squamata: Elapidae)
title_sort next-generation sequencing yields the complete mitogenome of the blue-banded sea-snake (squamata: elapidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687521/
https://www.ncbi.nlm.nih.gov/pubmed/33365528
http://dx.doi.org/10.1080/23802359.2019.1630334
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