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The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)

Potentilla freyniana Bornm. has radical leaves with petioles and trifoliolate distinguished from Potentilla fragarioides and Duchesnea indica. In this study, we presented first complete chloroplast genome of P. freyniana to understand its phylogenetic position. Its length is 156,381 bp long and has...

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Autores principales: Park, Jongsun, Heo, Kyeong-In, Kim, Yongsung, Kwon, Woochan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687524/
https://www.ncbi.nlm.nih.gov/pubmed/33365568
http://dx.doi.org/10.1080/23802359.2019.1565977
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author Park, Jongsun
Heo, Kyeong-In
Kim, Yongsung
Kwon, Woochan
author_facet Park, Jongsun
Heo, Kyeong-In
Kim, Yongsung
Kwon, Woochan
author_sort Park, Jongsun
collection PubMed
description Potentilla freyniana Bornm. has radical leaves with petioles and trifoliolate distinguished from Potentilla fragarioides and Duchesnea indica. In this study, we presented first complete chloroplast genome of P. freyniana to understand its phylogenetic position. Its length is 156,381 bp long and has four subregions: 85,724 bp of large single copy (LSC) and 18,617 bp of small single copy (SSC) regions are separated by 26,020 bp of inverted repeat (IR) regions including 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC, and IR regions are 34.8%, 30.7%, and 42.7%, respectively. Phylogenetic trees show that phylogenetic position of P. freyniana disagrees with three phylogenetic studies, showing that more Potentilla chloroplast genomes are required for clarifying Potentilla phylogeny.
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spelling pubmed-76875242020-12-22 The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) Park, Jongsun Heo, Kyeong-In Kim, Yongsung Kwon, Woochan Mitochondrial DNA B Resour Mitogenome Announcement Potentilla freyniana Bornm. has radical leaves with petioles and trifoliolate distinguished from Potentilla fragarioides and Duchesnea indica. In this study, we presented first complete chloroplast genome of P. freyniana to understand its phylogenetic position. Its length is 156,381 bp long and has four subregions: 85,724 bp of large single copy (LSC) and 18,617 bp of small single copy (SSC) regions are separated by 26,020 bp of inverted repeat (IR) regions including 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC, and IR regions are 34.8%, 30.7%, and 42.7%, respectively. Phylogenetic trees show that phylogenetic position of P. freyniana disagrees with three phylogenetic studies, showing that more Potentilla chloroplast genomes are required for clarifying Potentilla phylogeny. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687524/ /pubmed/33365568 http://dx.doi.org/10.1080/23802359.2019.1565977 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Park, Jongsun
Heo, Kyeong-In
Kim, Yongsung
Kwon, Woochan
The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
title The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
title_full The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
title_fullStr The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
title_full_unstemmed The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
title_short The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
title_sort complete chloroplast genome of potentilla freyniana bornm. (rosaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687524/
https://www.ncbi.nlm.nih.gov/pubmed/33365568
http://dx.doi.org/10.1080/23802359.2019.1565977
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