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The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae)
Potentilla freyniana Bornm. has radical leaves with petioles and trifoliolate distinguished from Potentilla fragarioides and Duchesnea indica. In this study, we presented first complete chloroplast genome of P. freyniana to understand its phylogenetic position. Its length is 156,381 bp long and has...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687524/ https://www.ncbi.nlm.nih.gov/pubmed/33365568 http://dx.doi.org/10.1080/23802359.2019.1565977 |
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author | Park, Jongsun Heo, Kyeong-In Kim, Yongsung Kwon, Woochan |
author_facet | Park, Jongsun Heo, Kyeong-In Kim, Yongsung Kwon, Woochan |
author_sort | Park, Jongsun |
collection | PubMed |
description | Potentilla freyniana Bornm. has radical leaves with petioles and trifoliolate distinguished from Potentilla fragarioides and Duchesnea indica. In this study, we presented first complete chloroplast genome of P. freyniana to understand its phylogenetic position. Its length is 156,381 bp long and has four subregions: 85,724 bp of large single copy (LSC) and 18,617 bp of small single copy (SSC) regions are separated by 26,020 bp of inverted repeat (IR) regions including 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC, and IR regions are 34.8%, 30.7%, and 42.7%, respectively. Phylogenetic trees show that phylogenetic position of P. freyniana disagrees with three phylogenetic studies, showing that more Potentilla chloroplast genomes are required for clarifying Potentilla phylogeny. |
format | Online Article Text |
id | pubmed-7687524 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76875242020-12-22 The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) Park, Jongsun Heo, Kyeong-In Kim, Yongsung Kwon, Woochan Mitochondrial DNA B Resour Mitogenome Announcement Potentilla freyniana Bornm. has radical leaves with petioles and trifoliolate distinguished from Potentilla fragarioides and Duchesnea indica. In this study, we presented first complete chloroplast genome of P. freyniana to understand its phylogenetic position. Its length is 156,381 bp long and has four subregions: 85,724 bp of large single copy (LSC) and 18,617 bp of small single copy (SSC) regions are separated by 26,020 bp of inverted repeat (IR) regions including 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC, and IR regions are 34.8%, 30.7%, and 42.7%, respectively. Phylogenetic trees show that phylogenetic position of P. freyniana disagrees with three phylogenetic studies, showing that more Potentilla chloroplast genomes are required for clarifying Potentilla phylogeny. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687524/ /pubmed/33365568 http://dx.doi.org/10.1080/23802359.2019.1565977 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/ |
spellingShingle | Mitogenome Announcement Park, Jongsun Heo, Kyeong-In Kim, Yongsung Kwon, Woochan The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) |
title | The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) |
title_full | The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) |
title_fullStr | The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) |
title_full_unstemmed | The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) |
title_short | The complete chloroplast genome of Potentilla Freyniana Bornm. (Rosaceae) |
title_sort | complete chloroplast genome of potentilla freyniana bornm. (rosaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687524/ https://www.ncbi.nlm.nih.gov/pubmed/33365568 http://dx.doi.org/10.1080/23802359.2019.1565977 |
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