Cargando…
Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
Blastus Lour. belongs to tribe Sonerileae (Melastomataceae), comprising about 18 species worldwide. Herein, we presented, assembled, and annotated the first complete chloroplast genome of Blastus (B. cochinchinensis). The complete chloroplast genome (cp) size of B. cochinchinensis was 156,005 bp in...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687533/ https://www.ncbi.nlm.nih.gov/pubmed/33365466 http://dx.doi.org/10.1080/23802359.2019.1624639 |
_version_ | 1783613541215895552 |
---|---|
author | Zhang, Wenchun Wen, Zhenying Zeng, Sijin Luo, Liang Peng, Donghui |
author_facet | Zhang, Wenchun Wen, Zhenying Zeng, Sijin Luo, Liang Peng, Donghui |
author_sort | Zhang, Wenchun |
collection | PubMed |
description | Blastus Lour. belongs to tribe Sonerileae (Melastomataceae), comprising about 18 species worldwide. Herein, we presented, assembled, and annotated the first complete chloroplast genome of Blastus (B. cochinchinensis). The complete chloroplast genome (cp) size of B. cochinchinensis was 156,005 bp in length, containing a pair of 26,812 bp inverted repeat (IR) regions, which were separated by a large single-copy region (LSC) 85,926 bp and a small single-copy (SSC) region 16,455 bp. The overall GC content of the genome was 37.0%. The whole genome contained 129 unique genes, including 81 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that B. cochinchinens was sister to Barthea barthei. The present study provided B. cochinchinensis genomic information that may be found useful in conservation and molecular phylogenetic studies on Blastus. |
format | Online Article Text |
id | pubmed-7687533 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76875332020-12-22 Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) Zhang, Wenchun Wen, Zhenying Zeng, Sijin Luo, Liang Peng, Donghui Mitochondrial DNA B Resour Mitogenome Announcement Blastus Lour. belongs to tribe Sonerileae (Melastomataceae), comprising about 18 species worldwide. Herein, we presented, assembled, and annotated the first complete chloroplast genome of Blastus (B. cochinchinensis). The complete chloroplast genome (cp) size of B. cochinchinensis was 156,005 bp in length, containing a pair of 26,812 bp inverted repeat (IR) regions, which were separated by a large single-copy region (LSC) 85,926 bp and a small single-copy (SSC) region 16,455 bp. The overall GC content of the genome was 37.0%. The whole genome contained 129 unique genes, including 81 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that B. cochinchinens was sister to Barthea barthei. The present study provided B. cochinchinensis genomic information that may be found useful in conservation and molecular phylogenetic studies on Blastus. Taylor & Francis 2019-07-10 /pmc/articles/PMC7687533/ /pubmed/33365466 http://dx.doi.org/10.1080/23802359.2019.1624639 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/ |
spellingShingle | Mitogenome Announcement Zhang, Wenchun Wen, Zhenying Zeng, Sijin Luo, Liang Peng, Donghui Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) |
title | Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) |
title_full | Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) |
title_fullStr | Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) |
title_short | Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) |
title_sort | characterization of the complete chloroplast genome sequence of blastus cochinchinensis (melastomataceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687533/ https://www.ncbi.nlm.nih.gov/pubmed/33365466 http://dx.doi.org/10.1080/23802359.2019.1624639 |
work_keys_str_mv | AT zhangwenchun characterizationofthecompletechloroplastgenomesequenceofblastuscochinchinensismelastomataceae AT wenzhenying characterizationofthecompletechloroplastgenomesequenceofblastuscochinchinensismelastomataceae AT zengsijin characterizationofthecompletechloroplastgenomesequenceofblastuscochinchinensismelastomataceae AT luoliang characterizationofthecompletechloroplastgenomesequenceofblastuscochinchinensismelastomataceae AT pengdonghui characterizationofthecompletechloroplastgenomesequenceofblastuscochinchinensismelastomataceae |