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Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)

Blastus Lour. belongs to tribe Sonerileae (Melastomataceae), comprising about 18 species worldwide. Herein, we presented, assembled, and annotated the first complete chloroplast genome of Blastus (B. cochinchinensis). The complete chloroplast genome (cp) size of B. cochinchinensis was 156,005 bp in...

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Autores principales: Zhang, Wenchun, Wen, Zhenying, Zeng, Sijin, Luo, Liang, Peng, Donghui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687533/
https://www.ncbi.nlm.nih.gov/pubmed/33365466
http://dx.doi.org/10.1080/23802359.2019.1624639
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author Zhang, Wenchun
Wen, Zhenying
Zeng, Sijin
Luo, Liang
Peng, Donghui
author_facet Zhang, Wenchun
Wen, Zhenying
Zeng, Sijin
Luo, Liang
Peng, Donghui
author_sort Zhang, Wenchun
collection PubMed
description Blastus Lour. belongs to tribe Sonerileae (Melastomataceae), comprising about 18 species worldwide. Herein, we presented, assembled, and annotated the first complete chloroplast genome of Blastus (B. cochinchinensis). The complete chloroplast genome (cp) size of B. cochinchinensis was 156,005 bp in length, containing a pair of 26,812 bp inverted repeat (IR) regions, which were separated by a large single-copy region (LSC) 85,926 bp and a small single-copy (SSC) region 16,455 bp. The overall GC content of the genome was 37.0%. The whole genome contained 129 unique genes, including 81 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that B. cochinchinens was sister to Barthea barthei. The present study provided B. cochinchinensis genomic information that may be found useful in conservation and molecular phylogenetic studies on Blastus.
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spelling pubmed-76875332020-12-22 Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae) Zhang, Wenchun Wen, Zhenying Zeng, Sijin Luo, Liang Peng, Donghui Mitochondrial DNA B Resour Mitogenome Announcement Blastus Lour. belongs to tribe Sonerileae (Melastomataceae), comprising about 18 species worldwide. Herein, we presented, assembled, and annotated the first complete chloroplast genome of Blastus (B. cochinchinensis). The complete chloroplast genome (cp) size of B. cochinchinensis was 156,005 bp in length, containing a pair of 26,812 bp inverted repeat (IR) regions, which were separated by a large single-copy region (LSC) 85,926 bp and a small single-copy (SSC) region 16,455 bp. The overall GC content of the genome was 37.0%. The whole genome contained 129 unique genes, including 81 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that B. cochinchinens was sister to Barthea barthei. The present study provided B. cochinchinensis genomic information that may be found useful in conservation and molecular phylogenetic studies on Blastus. Taylor & Francis 2019-07-10 /pmc/articles/PMC7687533/ /pubmed/33365466 http://dx.doi.org/10.1080/23802359.2019.1624639 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Zhang, Wenchun
Wen, Zhenying
Zeng, Sijin
Luo, Liang
Peng, Donghui
Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
title Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
title_full Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
title_fullStr Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
title_short Characterization of the complete chloroplast genome sequence of Blastus cochinchinensis (Melastomataceae)
title_sort characterization of the complete chloroplast genome sequence of blastus cochinchinensis (melastomataceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687533/
https://www.ncbi.nlm.nih.gov/pubmed/33365466
http://dx.doi.org/10.1080/23802359.2019.1624639
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