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The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions

Neopicrorhiza scrophulariiflora (Pennell) Hong, an endangered perennial species, is endemic to the Eastern Himalayas and Hengduan Mountains. In this study, we have sequenced the complete chloroplast genome of N. scrophulariiflora, which is 152,643 bp in length, including two inverted repeat (IR, 25,...

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Autores principales: Zhang, Ying-Min, Qian, Zi-Gang, Zhang, Ai-Li, Yang, Cong-Wei, Li, Guo-Dong, Liu, Xiao-Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687538/
https://www.ncbi.nlm.nih.gov/pubmed/33365601
http://dx.doi.org/10.1080/23802359.2019.1639560
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author Zhang, Ying-Min
Qian, Zi-Gang
Zhang, Ai-Li
Yang, Cong-Wei
Li, Guo-Dong
Liu, Xiao-Li
author_facet Zhang, Ying-Min
Qian, Zi-Gang
Zhang, Ai-Li
Yang, Cong-Wei
Li, Guo-Dong
Liu, Xiao-Li
author_sort Zhang, Ying-Min
collection PubMed
description Neopicrorhiza scrophulariiflora (Pennell) Hong, an endangered perennial species, is endemic to the Eastern Himalayas and Hengduan Mountains. In this study, we have sequenced the complete chloroplast genome of N. scrophulariiflora, which is 152,643 bp in length, including two inverted repeat (IR, 25,829 bp) regions, one large single copy region (LSC) and one small single copy region (SSC) of 83,191 bp and 17,794 bp, respectively. The cp genome has 131 annotated genes, including 86 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of it is 38.1%. Phylogenetic analysis using total chloroplast genome DNA sequence of 14 species revealed that N. scrophulariiflora was closely relates to two species of Veronica with 100% bootstrap value.
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spelling pubmed-76875382020-12-22 The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions Zhang, Ying-Min Qian, Zi-Gang Zhang, Ai-Li Yang, Cong-Wei Li, Guo-Dong Liu, Xiao-Li Mitochondrial DNA B Resour Mitogenome Announcement Neopicrorhiza scrophulariiflora (Pennell) Hong, an endangered perennial species, is endemic to the Eastern Himalayas and Hengduan Mountains. In this study, we have sequenced the complete chloroplast genome of N. scrophulariiflora, which is 152,643 bp in length, including two inverted repeat (IR, 25,829 bp) regions, one large single copy region (LSC) and one small single copy region (SSC) of 83,191 bp and 17,794 bp, respectively. The cp genome has 131 annotated genes, including 86 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of it is 38.1%. Phylogenetic analysis using total chloroplast genome DNA sequence of 14 species revealed that N. scrophulariiflora was closely relates to two species of Veronica with 100% bootstrap value. Taylor & Francis 2019-07-16 /pmc/articles/PMC7687538/ /pubmed/33365601 http://dx.doi.org/10.1080/23802359.2019.1639560 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Ying-Min
Qian, Zi-Gang
Zhang, Ai-Li
Yang, Cong-Wei
Li, Guo-Dong
Liu, Xiao-Li
The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
title The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
title_full The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
title_fullStr The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
title_full_unstemmed The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
title_short The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
title_sort complete plastid genome sequence of neopicrorhiza scrophulariiflora (plantaginaceae): an endangered species endemic to the himalayas regions
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687538/
https://www.ncbi.nlm.nih.gov/pubmed/33365601
http://dx.doi.org/10.1080/23802359.2019.1639560
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