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Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)

Michelia maudiae is an evergreen ornamental shrub with strong aromatic flowers with great important for horticulture. In this study, the complete chloroplast genome of M. maudiae was assembled based on the Illumina sequences. The genome was 160,154 bp in length presenting a typical quadripartite str...

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Detalles Bibliográficos
Autores principales: Wang, Junqing, Li, Yanyan, Wang, Qiong, Fan, Weiwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687539/
https://www.ncbi.nlm.nih.gov/pubmed/33365447
http://dx.doi.org/10.1080/23802359.2019.1623110
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author Wang, Junqing
Li, Yanyan
Wang, Qiong
Fan, Weiwei
author_facet Wang, Junqing
Li, Yanyan
Wang, Qiong
Fan, Weiwei
author_sort Wang, Junqing
collection PubMed
description Michelia maudiae is an evergreen ornamental shrub with strong aromatic flowers with great important for horticulture. In this study, the complete chloroplast genome of M. maudiae was assembled based on the Illumina sequences. The genome was 160,154 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,575 bp), a large single copy region (LSC, 88,200 bp) and a small single copy region (SSC, 18,804 bp). The overall GC content was 39.24%. A total of 130 genes were identified, including 83 protein-coding genes, 38 transfer RNA genes, and eight rRNA genes. Twelve gene species contained one or two introns. The maximum-likelihood phylogenetic analysis revealed that M. maudiae was closely related with Manglietia insignis.
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spelling pubmed-76875392020-12-22 Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) Wang, Junqing Li, Yanyan Wang, Qiong Fan, Weiwei Mitochondrial DNA B Resour Mitogenome Announcement Michelia maudiae is an evergreen ornamental shrub with strong aromatic flowers with great important for horticulture. In this study, the complete chloroplast genome of M. maudiae was assembled based on the Illumina sequences. The genome was 160,154 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,575 bp), a large single copy region (LSC, 88,200 bp) and a small single copy region (SSC, 18,804 bp). The overall GC content was 39.24%. A total of 130 genes were identified, including 83 protein-coding genes, 38 transfer RNA genes, and eight rRNA genes. Twelve gene species contained one or two introns. The maximum-likelihood phylogenetic analysis revealed that M. maudiae was closely related with Manglietia insignis. Taylor & Francis 2019-07-10 /pmc/articles/PMC7687539/ /pubmed/33365447 http://dx.doi.org/10.1080/23802359.2019.1623110 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Junqing
Li, Yanyan
Wang, Qiong
Fan, Weiwei
Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
title Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
title_full Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
title_fullStr Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
title_short Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
title_sort characterization of the complete chloroplast genome of michelia maudiae (magnoliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687539/
https://www.ncbi.nlm.nih.gov/pubmed/33365447
http://dx.doi.org/10.1080/23802359.2019.1623110
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