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Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae)
Michelia maudiae is an evergreen ornamental shrub with strong aromatic flowers with great important for horticulture. In this study, the complete chloroplast genome of M. maudiae was assembled based on the Illumina sequences. The genome was 160,154 bp in length presenting a typical quadripartite str...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687539/ https://www.ncbi.nlm.nih.gov/pubmed/33365447 http://dx.doi.org/10.1080/23802359.2019.1623110 |
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author | Wang, Junqing Li, Yanyan Wang, Qiong Fan, Weiwei |
author_facet | Wang, Junqing Li, Yanyan Wang, Qiong Fan, Weiwei |
author_sort | Wang, Junqing |
collection | PubMed |
description | Michelia maudiae is an evergreen ornamental shrub with strong aromatic flowers with great important for horticulture. In this study, the complete chloroplast genome of M. maudiae was assembled based on the Illumina sequences. The genome was 160,154 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,575 bp), a large single copy region (LSC, 88,200 bp) and a small single copy region (SSC, 18,804 bp). The overall GC content was 39.24%. A total of 130 genes were identified, including 83 protein-coding genes, 38 transfer RNA genes, and eight rRNA genes. Twelve gene species contained one or two introns. The maximum-likelihood phylogenetic analysis revealed that M. maudiae was closely related with Manglietia insignis. |
format | Online Article Text |
id | pubmed-7687539 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76875392020-12-22 Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) Wang, Junqing Li, Yanyan Wang, Qiong Fan, Weiwei Mitochondrial DNA B Resour Mitogenome Announcement Michelia maudiae is an evergreen ornamental shrub with strong aromatic flowers with great important for horticulture. In this study, the complete chloroplast genome of M. maudiae was assembled based on the Illumina sequences. The genome was 160,154 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,575 bp), a large single copy region (LSC, 88,200 bp) and a small single copy region (SSC, 18,804 bp). The overall GC content was 39.24%. A total of 130 genes were identified, including 83 protein-coding genes, 38 transfer RNA genes, and eight rRNA genes. Twelve gene species contained one or two introns. The maximum-likelihood phylogenetic analysis revealed that M. maudiae was closely related with Manglietia insignis. Taylor & Francis 2019-07-10 /pmc/articles/PMC7687539/ /pubmed/33365447 http://dx.doi.org/10.1080/23802359.2019.1623110 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Junqing Li, Yanyan Wang, Qiong Fan, Weiwei Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) |
title | Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) |
title_full | Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) |
title_fullStr | Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) |
title_short | Characterization of the complete chloroplast genome of Michelia maudiae (Magnoliaceae) |
title_sort | characterization of the complete chloroplast genome of michelia maudiae (magnoliaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687539/ https://www.ncbi.nlm.nih.gov/pubmed/33365447 http://dx.doi.org/10.1080/23802359.2019.1623110 |
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