Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb

Atriplex centralasiatica, an annual halophytic herb, is one of the most important Chinese herbal medicines, forages and indicator plants for saline-alkali soil. In this study, we report the complete plastome of A. centralasiatica. The plastome was 152,237 bp in length and comprises a large single-co...

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Autores principales: Zhang, Xue-Jie, Wang, Ning, Zhang, Luo-Yan, Fan, Shou-Jin, Qu, Xiao-Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687555/
https://www.ncbi.nlm.nih.gov/pubmed/33365589
http://dx.doi.org/10.1080/23802359.2019.1638329
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author Zhang, Xue-Jie
Wang, Ning
Zhang, Luo-Yan
Fan, Shou-Jin
Qu, Xiao-Jian
author_facet Zhang, Xue-Jie
Wang, Ning
Zhang, Luo-Yan
Fan, Shou-Jin
Qu, Xiao-Jian
author_sort Zhang, Xue-Jie
collection PubMed
description Atriplex centralasiatica, an annual halophytic herb, is one of the most important Chinese herbal medicines, forages and indicator plants for saline-alkali soil. In this study, we report the complete plastome of A. centralasiatica. The plastome was 152,237 bp in length and comprises a large single-copy region (83,721 bp), a small single-copy region (18,096 bp), and a pair of inverted repeats (25,210 bp). It encodes 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNAs and 4 rRNAs. The overall GC content of this plastome was 37.3%. Phylogenomic analysis based on 21 plastomes revealed that A. centralasiatica was closely related to the genus Chenopodium.
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spelling pubmed-76875552020-12-22 Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb Zhang, Xue-Jie Wang, Ning Zhang, Luo-Yan Fan, Shou-Jin Qu, Xiao-Jian Mitochondrial DNA B Resour Mitogenome Announcement Atriplex centralasiatica, an annual halophytic herb, is one of the most important Chinese herbal medicines, forages and indicator plants for saline-alkali soil. In this study, we report the complete plastome of A. centralasiatica. The plastome was 152,237 bp in length and comprises a large single-copy region (83,721 bp), a small single-copy region (18,096 bp), and a pair of inverted repeats (25,210 bp). It encodes 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNAs and 4 rRNAs. The overall GC content of this plastome was 37.3%. Phylogenomic analysis based on 21 plastomes revealed that A. centralasiatica was closely related to the genus Chenopodium. Taylor & Francis 2019-07-13 /pmc/articles/PMC7687555/ /pubmed/33365589 http://dx.doi.org/10.1080/23802359.2019.1638329 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Xue-Jie
Wang, Ning
Zhang, Luo-Yan
Fan, Shou-Jin
Qu, Xiao-Jian
Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb
title Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb
title_full Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb
title_fullStr Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb
title_full_unstemmed Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb
title_short Characterization of the complete plastome of Atriplex centralasiatica (Chenopodiaceae), an annual halophytic herb
title_sort characterization of the complete plastome of atriplex centralasiatica (chenopodiaceae), an annual halophytic herb
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687555/
https://www.ncbi.nlm.nih.gov/pubmed/33365589
http://dx.doi.org/10.1080/23802359.2019.1638329
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